Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.74■□□□□ 0.59
Cpsf4Q8BQZ5 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Cpsf4Q8BQZ5 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpsf4Q8BQZ5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpsf4Q8BQZ5 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpsf4Q8BQZ5 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Cpsf4Q8BQZ5 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf4Q8BQZ5 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf4Q8BQZ5 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf4Q8BQZ5 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Cpsf4Q8BQZ5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf4Q8BQZ5 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf4Q8BQZ5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf4Q8BQZ5 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf4Q8BQZ5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf4Q8BQZ5 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf4Q8BQZ5 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf4Q8BQZ5 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Cpsf4Q8BQZ5 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cpsf4Q8BQZ5 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cpsf4Q8BQZ5 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf4Q8BQZ5 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf4Q8BQZ5 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf4Q8BQZ5 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf4Q8BQZ5 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.72■□□□□ 0.59
Cpsf4Q8BQZ5 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cpsf4Q8BQZ5 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cpsf4Q8BQZ5 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Cpsf4Q8BQZ5 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Cpsf4Q8BQZ5 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Cpsf4Q8BQZ5 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf4Q8BQZ5 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf4Q8BQZ5 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Cpsf4Q8BQZ5 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.71■□□□□ 0.59
Cpsf4Q8BQZ5 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.71■□□□□ 0.59
Cpsf4Q8BQZ5 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf4Q8BQZ5 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.71■□□□□ 0.59
Cpsf4Q8BQZ5 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.71■□□□□ 0.59
Cpsf4Q8BQZ5 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Cpsf4Q8BQZ5 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Cpsf4Q8BQZ5 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf4Q8BQZ5 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Cpsf4Q8BQZ5 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf4Q8BQZ5 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf4Q8BQZ5 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf4Q8BQZ5 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf4Q8BQZ5 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf4Q8BQZ5 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf4Q8BQZ5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.7■□□□□ 0.58
Cpsf4Q8BQZ5 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cpsf4Q8BQZ5 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.7■□□□□ 0.58
Cpsf4Q8BQZ5 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.7■□□□□ 0.58
Cpsf4Q8BQZ5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf4Q8BQZ5 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf4Q8BQZ5 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf4Q8BQZ5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf4Q8BQZ5 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf4Q8BQZ5 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Cpsf4Q8BQZ5 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf4Q8BQZ5 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf4Q8BQZ5 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf4Q8BQZ5 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Cpsf4Q8BQZ5 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.69■□□□□ 0.58
Cpsf4Q8BQZ5 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.69■□□□□ 0.58
Cpsf4Q8BQZ5 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cpsf4Q8BQZ5 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Cpsf4Q8BQZ5 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpsf4Q8BQZ5 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cpsf4Q8BQZ5 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cpsf4Q8BQZ5 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpsf4Q8BQZ5 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Cpsf4Q8BQZ5 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpsf4Q8BQZ5 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpsf4Q8BQZ5 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
Cpsf4Q8BQZ5 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Cpsf4Q8BQZ5 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpsf4Q8BQZ5 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Cpsf4Q8BQZ5 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpsf4Q8BQZ5 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpsf4Q8BQZ5 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cpsf4Q8BQZ5 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpsf4Q8BQZ5 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpsf4Q8BQZ5 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpsf4Q8BQZ5 Gm8493-201ENSMUST00000196881 489 ntBASIC18.67■□□□□ 0.58
Cpsf4Q8BQZ5 Gm43173-201ENSMUST00000202246 593 ntBASIC18.67■□□□□ 0.58
Cpsf4Q8BQZ5 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.67■□□□□ 0.58
Cpsf4Q8BQZ5 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpsf4Q8BQZ5 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cpsf4Q8BQZ5 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf4Q8BQZ5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Cpsf4Q8BQZ5 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf4Q8BQZ5 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.66■□□□□ 0.58
Cpsf4Q8BQZ5 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf4Q8BQZ5 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf4Q8BQZ5 Gm43017-201ENSMUST00000198296 752 ntBASIC18.66■□□□□ 0.58
Cpsf4Q8BQZ5 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf4Q8BQZ5 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf4Q8BQZ5 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf4Q8BQZ5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Cpsf4Q8BQZ5 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 426.4 ms