Protein–RNA interactions for Protein: Q8BNE1

Tcaf1, TRPM8 channel-associated factor 1, mousemouse

Predictions only

Length 924 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcaf1Q8BNE1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tcaf1Q8BNE1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tcaf1Q8BNE1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tcaf1Q8BNE1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tcaf1Q8BNE1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tcaf1Q8BNE1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tcaf1Q8BNE1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tcaf1Q8BNE1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.98■□□□□ 0.95
Tcaf1Q8BNE1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.98■□□□□ 0.95
Tcaf1Q8BNE1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
Tcaf1Q8BNE1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tcaf1Q8BNE1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tcaf1Q8BNE1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tcaf1Q8BNE1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tcaf1Q8BNE1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tcaf1Q8BNE1 Gm42642-201ENSMUST00000200683 355 ntBASIC20.97■□□□□ 0.95
Tcaf1Q8BNE1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tcaf1Q8BNE1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tcaf1Q8BNE1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tcaf1Q8BNE1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tcaf1Q8BNE1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tcaf1Q8BNE1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tcaf1Q8BNE1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tcaf1Q8BNE1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tcaf1Q8BNE1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tcaf1Q8BNE1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Tcaf1Q8BNE1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tcaf1Q8BNE1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Tcaf1Q8BNE1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tcaf1Q8BNE1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Tcaf1Q8BNE1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.96■□□□□ 0.95
Tcaf1Q8BNE1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
Tcaf1Q8BNE1 Reep4-203ENSMUST00000226563 1444 ntBASIC20.95■□□□□ 0.95
Tcaf1Q8BNE1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tcaf1Q8BNE1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tcaf1Q8BNE1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tcaf1Q8BNE1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tcaf1Q8BNE1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tcaf1Q8BNE1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tcaf1Q8BNE1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Tcaf1Q8BNE1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tcaf1Q8BNE1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tcaf1Q8BNE1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Tcaf1Q8BNE1 Gm26571-201ENSMUST00000181399 666 ntBASIC20.94■□□□□ 0.94
Tcaf1Q8BNE1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tcaf1Q8BNE1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tcaf1Q8BNE1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tcaf1Q8BNE1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tcaf1Q8BNE1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tcaf1Q8BNE1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tcaf1Q8BNE1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Tcaf1Q8BNE1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Tcaf1Q8BNE1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.93■□□□□ 0.94
Tcaf1Q8BNE1 Gm10033-202ENSMUST00000211874 928 ntBASIC20.93■□□□□ 0.94
Tcaf1Q8BNE1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tcaf1Q8BNE1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tcaf1Q8BNE1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
Tcaf1Q8BNE1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tcaf1Q8BNE1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tcaf1Q8BNE1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tcaf1Q8BNE1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tcaf1Q8BNE1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tcaf1Q8BNE1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.92■□□□□ 0.94
Tcaf1Q8BNE1 Gm42778-201ENSMUST00000199644 553 ntBASIC20.92■□□□□ 0.94
Tcaf1Q8BNE1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.92■□□□□ 0.94
Tcaf1Q8BNE1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tcaf1Q8BNE1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tcaf1Q8BNE1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.91■□□□□ 0.94
Tcaf1Q8BNE1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tcaf1Q8BNE1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tcaf1Q8BNE1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tcaf1Q8BNE1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tcaf1Q8BNE1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
Tcaf1Q8BNE1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
Tcaf1Q8BNE1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tcaf1Q8BNE1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tcaf1Q8BNE1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tcaf1Q8BNE1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tcaf1Q8BNE1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tcaf1Q8BNE1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tcaf1Q8BNE1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Tcaf1Q8BNE1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Tcaf1Q8BNE1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tcaf1Q8BNE1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tcaf1Q8BNE1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tcaf1Q8BNE1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tcaf1Q8BNE1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tcaf1Q8BNE1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tcaf1Q8BNE1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Tcaf1Q8BNE1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Tcaf1Q8BNE1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tcaf1Q8BNE1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.9■□□□□ 0.94
Tcaf1Q8BNE1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tcaf1Q8BNE1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.89■□□□□ 0.93
Tcaf1Q8BNE1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tcaf1Q8BNE1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tcaf1Q8BNE1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tcaf1Q8BNE1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tcaf1Q8BNE1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tcaf1Q8BNE1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms