Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm4Q8BKA3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm4Q8BKA3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm4Q8BKA3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.79■□□□□ 0.28
Srrm4Q8BKA3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm4Q8BKA3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Srrm4Q8BKA3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm4Q8BKA3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.79■□□□□ 0.28
Srrm4Q8BKA3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm4Q8BKA3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm4Q8BKA3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
Srrm4Q8BKA3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Srrm4Q8BKA3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm4Q8BKA3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm4Q8BKA3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm4Q8BKA3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm4Q8BKA3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Srrm4Q8BKA3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm4Q8BKA3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm4Q8BKA3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm4Q8BKA3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm4Q8BKA3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Srrm4Q8BKA3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm4Q8BKA3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm4Q8BKA3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm4Q8BKA3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Srrm4Q8BKA3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm4Q8BKA3 Gm26833-201ENSMUST00000180899 440 ntBASIC16.78■□□□□ 0.28
Srrm4Q8BKA3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm4Q8BKA3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Srrm4Q8BKA3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm4Q8BKA3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Srrm4Q8BKA3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm4Q8BKA3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Srrm4Q8BKA3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srrm4Q8BKA3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srrm4Q8BKA3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.77■□□□□ 0.28
Srrm4Q8BKA3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Srrm4Q8BKA3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Srrm4Q8BKA3 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srrm4Q8BKA3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Srrm4Q8BKA3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Srrm4Q8BKA3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Srrm4Q8BKA3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.76■□□□□ 0.27
Srrm4Q8BKA3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm4Q8BKA3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm4Q8BKA3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm4Q8BKA3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Srrm4Q8BKA3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm4Q8BKA3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.76■□□□□ 0.27
Srrm4Q8BKA3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm4Q8BKA3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Srrm4Q8BKA3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Srrm4Q8BKA3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Srrm4Q8BKA3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.76■□□□□ 0.27
Srrm4Q8BKA3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm4Q8BKA3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm4Q8BKA3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm4Q8BKA3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.76■□□□□ 0.27
Srrm4Q8BKA3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm4Q8BKA3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Srrm4Q8BKA3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Srrm4Q8BKA3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Srrm4Q8BKA3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Srrm4Q8BKA3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Srrm4Q8BKA3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Srrm4Q8BKA3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Srrm4Q8BKA3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Srrm4Q8BKA3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Srrm4Q8BKA3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Srrm4Q8BKA3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Srrm4Q8BKA3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Srrm4Q8BKA3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.74■□□□□ 0.27
Srrm4Q8BKA3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Srrm4Q8BKA3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Srrm4Q8BKA3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Srrm4Q8BKA3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Srrm4Q8BKA3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Srrm4Q8BKA3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.74■□□□□ 0.27
Srrm4Q8BKA3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.74■□□□□ 0.27
Srrm4Q8BKA3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Srrm4Q8BKA3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Srrm4Q8BKA3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Srrm4Q8BKA3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.73■□□□□ 0.27
Srrm4Q8BKA3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Srrm4Q8BKA3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Srrm4Q8BKA3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Srrm4Q8BKA3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Srrm4Q8BKA3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Srrm4Q8BKA3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Srrm4Q8BKA3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Srrm4Q8BKA3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Srrm4Q8BKA3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Srrm4Q8BKA3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.72■□□□□ 0.27
Srrm4Q8BKA3 Gm43060-201ENSMUST00000200621 289 ntBASIC16.72■□□□□ 0.27
Srrm4Q8BKA3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
Srrm4Q8BKA3 Gm40848-201ENSMUST00000221998 324 ntBASIC16.72■□□□□ 0.27
Srrm4Q8BKA3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Srrm4Q8BKA3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Srrm4Q8BKA3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms