Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Samm50Q8BGH2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Samm50Q8BGH2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Samm50Q8BGH2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Samm50Q8BGH2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Samm50Q8BGH2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Samm50Q8BGH2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Samm50Q8BGH2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Samm50Q8BGH2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC22.63■■□□□ 1.21
Samm50Q8BGH2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Samm50Q8BGH2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Samm50Q8BGH2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Samm50Q8BGH2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Samm50Q8BGH2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Samm50Q8BGH2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC22.62■■□□□ 1.21
Samm50Q8BGH2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC22.62■■□□□ 1.21
Samm50Q8BGH2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Samm50Q8BGH2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Samm50Q8BGH2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Samm50Q8BGH2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Samm50Q8BGH2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Samm50Q8BGH2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Samm50Q8BGH2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Samm50Q8BGH2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Samm50Q8BGH2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Samm50Q8BGH2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Samm50Q8BGH2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Samm50Q8BGH2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Samm50Q8BGH2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Samm50Q8BGH2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Samm50Q8BGH2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Samm50Q8BGH2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Samm50Q8BGH2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Samm50Q8BGH2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC22.61■■□□□ 1.21
Samm50Q8BGH2 Mir7075-201ENSMUST00000184187 82 ntBASIC22.61■■□□□ 1.21
Samm50Q8BGH2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Samm50Q8BGH2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC22.61■■□□□ 1.21
Samm50Q8BGH2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC22.61■■□□□ 1.21
Samm50Q8BGH2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Samm50Q8BGH2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC22.6■■□□□ 1.21
Samm50Q8BGH2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Samm50Q8BGH2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Samm50Q8BGH2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC22.6■■□□□ 1.21
Samm50Q8BGH2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Samm50Q8BGH2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Samm50Q8BGH2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Samm50Q8BGH2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Samm50Q8BGH2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Samm50Q8BGH2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Samm50Q8BGH2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC22.59■■□□□ 1.21
Samm50Q8BGH2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
Samm50Q8BGH2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Samm50Q8BGH2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Samm50Q8BGH2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Samm50Q8BGH2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Samm50Q8BGH2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Samm50Q8BGH2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Samm50Q8BGH2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Samm50Q8BGH2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
Samm50Q8BGH2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Samm50Q8BGH2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Samm50Q8BGH2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Samm50Q8BGH2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC22.57■■□□□ 1.2
Samm50Q8BGH2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Samm50Q8BGH2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC22.57■■□□□ 1.2
Samm50Q8BGH2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Samm50Q8BGH2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC22.57■■□□□ 1.2
Samm50Q8BGH2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Samm50Q8BGH2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Samm50Q8BGH2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Samm50Q8BGH2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC22.57■■□□□ 1.2
Samm50Q8BGH2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Samm50Q8BGH2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Samm50Q8BGH2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Samm50Q8BGH2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Samm50Q8BGH2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Samm50Q8BGH2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Samm50Q8BGH2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Samm50Q8BGH2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Samm50Q8BGH2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Samm50Q8BGH2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Samm50Q8BGH2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Samm50Q8BGH2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Samm50Q8BGH2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Samm50Q8BGH2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC22.56■■□□□ 1.2
Samm50Q8BGH2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Samm50Q8BGH2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Samm50Q8BGH2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Samm50Q8BGH2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Samm50Q8BGH2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Samm50Q8BGH2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Samm50Q8BGH2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC22.54■■□□□ 1.2
Samm50Q8BGH2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Samm50Q8BGH2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Samm50Q8BGH2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Samm50Q8BGH2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
Samm50Q8BGH2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Samm50Q8BGH2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
Samm50Q8BGH2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC22.54■■□□□ 1.2
Samm50Q8BGH2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms