Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim6Q8BGE7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.49■□□□□ 0.87
Trim6Q8BGE7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
Trim6Q8BGE7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim6Q8BGE7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim6Q8BGE7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim6Q8BGE7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim6Q8BGE7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Trim6Q8BGE7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trim6Q8BGE7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim6Q8BGE7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.48■□□□□ 0.87
Trim6Q8BGE7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.48■□□□□ 0.87
Trim6Q8BGE7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.48■□□□□ 0.87
Trim6Q8BGE7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim6Q8BGE7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim6Q8BGE7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim6Q8BGE7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Trim6Q8BGE7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim6Q8BGE7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim6Q8BGE7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim6Q8BGE7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Trim6Q8BGE7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.47■□□□□ 0.87
Trim6Q8BGE7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trim6Q8BGE7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim6Q8BGE7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim6Q8BGE7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim6Q8BGE7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim6Q8BGE7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Trim6Q8BGE7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim6Q8BGE7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim6Q8BGE7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.46■□□□□ 0.87
Trim6Q8BGE7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim6Q8BGE7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim6Q8BGE7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Trim6Q8BGE7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim6Q8BGE7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim6Q8BGE7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.46■□□□□ 0.87
Trim6Q8BGE7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trim6Q8BGE7 Rarb-207ENSMUST00000225921 2756 ntBASIC20.46■□□□□ 0.87
Trim6Q8BGE7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim6Q8BGE7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim6Q8BGE7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim6Q8BGE7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim6Q8BGE7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Trim6Q8BGE7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Trim6Q8BGE7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim6Q8BGE7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Trim6Q8BGE7 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.45■□□□□ 0.86
Trim6Q8BGE7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Trim6Q8BGE7 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.45■□□□□ 0.86
Trim6Q8BGE7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.45■□□□□ 0.86
Trim6Q8BGE7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim6Q8BGE7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Trim6Q8BGE7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.45■□□□□ 0.86
Trim6Q8BGE7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim6Q8BGE7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim6Q8BGE7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim6Q8BGE7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim6Q8BGE7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim6Q8BGE7 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.45■□□□□ 0.86
Trim6Q8BGE7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.45■□□□□ 0.86
Trim6Q8BGE7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Trim6Q8BGE7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim6Q8BGE7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim6Q8BGE7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Trim6Q8BGE7 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim6Q8BGE7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim6Q8BGE7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim6Q8BGE7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim6Q8BGE7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trim6Q8BGE7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim6Q8BGE7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.43■□□□□ 0.86
Trim6Q8BGE7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.43■□□□□ 0.86
Trim6Q8BGE7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim6Q8BGE7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim6Q8BGE7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim6Q8BGE7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Trim6Q8BGE7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim6Q8BGE7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim6Q8BGE7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.42■□□□□ 0.86
Trim6Q8BGE7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim6Q8BGE7 Etf1-202ENSMUST00000180351 108 ntBASIC20.42■□□□□ 0.86
Trim6Q8BGE7 Gm15820-201ENSMUST00000201566 728 ntBASIC20.42■□□□□ 0.86
Trim6Q8BGE7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim6Q8BGE7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.42■□□□□ 0.86
Trim6Q8BGE7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim6Q8BGE7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim6Q8BGE7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim6Q8BGE7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim6Q8BGE7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Trim6Q8BGE7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim6Q8BGE7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim6Q8BGE7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.41■□□□□ 0.86
Trim6Q8BGE7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim6Q8BGE7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim6Q8BGE7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim6Q8BGE7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.41■□□□□ 0.86
Trim6Q8BGE7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.41■□□□□ 0.86
Trim6Q8BGE7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Trim6Q8BGE7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms