Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Npas4Q8BGD7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.55■□□□□ 0.88
Npas4Q8BGD7 Gm20049-201ENSMUST00000219950 730 ntBASIC20.55■□□□□ 0.88
Npas4Q8BGD7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Npas4Q8BGD7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Npas4Q8BGD7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Npas4Q8BGD7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Npas4Q8BGD7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Npas4Q8BGD7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Npas4Q8BGD7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Npas4Q8BGD7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Npas4Q8BGD7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Npas4Q8BGD7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Npas4Q8BGD7 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Npas4Q8BGD7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Npas4Q8BGD7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Npas4Q8BGD7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Npas4Q8BGD7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.54■□□□□ 0.88
Npas4Q8BGD7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Npas4Q8BGD7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Npas4Q8BGD7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Npas4Q8BGD7 Gm7860-201ENSMUST00000121190 879 ntBASIC20.53■□□□□ 0.88
Npas4Q8BGD7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.53■□□□□ 0.88
Npas4Q8BGD7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Npas4Q8BGD7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Npas4Q8BGD7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Npas4Q8BGD7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Npas4Q8BGD7 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Npas4Q8BGD7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Npas4Q8BGD7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Npas4Q8BGD7 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Npas4Q8BGD7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Npas4Q8BGD7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Npas4Q8BGD7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Npas4Q8BGD7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.51■□□□□ 0.87
Npas4Q8BGD7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.51■□□□□ 0.87
Npas4Q8BGD7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Npas4Q8BGD7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.51■□□□□ 0.87
Npas4Q8BGD7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Npas4Q8BGD7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Npas4Q8BGD7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Npas4Q8BGD7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Npas4Q8BGD7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.5■□□□□ 0.87
Npas4Q8BGD7 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Npas4Q8BGD7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Npas4Q8BGD7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Npas4Q8BGD7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Npas4Q8BGD7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Npas4Q8BGD7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Npas4Q8BGD7 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.5■□□□□ 0.87
Npas4Q8BGD7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Npas4Q8BGD7 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Npas4Q8BGD7 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Npas4Q8BGD7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Npas4Q8BGD7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Npas4Q8BGD7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Npas4Q8BGD7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Npas4Q8BGD7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Npas4Q8BGD7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.49■□□□□ 0.87
Npas4Q8BGD7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.49■□□□□ 0.87
Npas4Q8BGD7 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.49■□□□□ 0.87
Npas4Q8BGD7 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Npas4Q8BGD7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Npas4Q8BGD7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Npas4Q8BGD7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Npas4Q8BGD7 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Npas4Q8BGD7 Gm13168-201ENSMUST00000121771 632 ntBASIC20.48■□□□□ 0.87
Npas4Q8BGD7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.48■□□□□ 0.87
Npas4Q8BGD7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.48■□□□□ 0.87
Npas4Q8BGD7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Npas4Q8BGD7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Npas4Q8BGD7 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.48■□□□□ 0.87
Npas4Q8BGD7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Npas4Q8BGD7 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Npas4Q8BGD7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Npas4Q8BGD7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.47■□□□□ 0.87
Npas4Q8BGD7 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.47■□□□□ 0.87
Npas4Q8BGD7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.47■□□□□ 0.87
Npas4Q8BGD7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Npas4Q8BGD7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Npas4Q8BGD7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Npas4Q8BGD7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Npas4Q8BGD7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Npas4Q8BGD7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.47■□□□□ 0.87
Npas4Q8BGD7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npas4Q8BGD7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Npas4Q8BGD7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Npas4Q8BGD7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npas4Q8BGD7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npas4Q8BGD7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Npas4Q8BGD7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.46■□□□□ 0.87
Npas4Q8BGD7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.46■□□□□ 0.87
Npas4Q8BGD7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npas4Q8BGD7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npas4Q8BGD7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Npas4Q8BGD7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Npas4Q8BGD7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Npas4Q8BGD7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Npas4Q8BGD7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Npas4Q8BGD7 Gm37856-201ENSMUST00000191634 999 ntBASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms