Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim65Q8BFW4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim65Q8BFW4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim65Q8BFW4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim65Q8BFW4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Trim65Q8BFW4 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.78■□□□□ 0.92
Trim65Q8BFW4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim65Q8BFW4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim65Q8BFW4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim65Q8BFW4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim65Q8BFW4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim65Q8BFW4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.77■□□□□ 0.92
Trim65Q8BFW4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Trim65Q8BFW4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trim65Q8BFW4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trim65Q8BFW4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim65Q8BFW4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim65Q8BFW4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim65Q8BFW4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim65Q8BFW4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim65Q8BFW4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim65Q8BFW4 Iqck-206ENSMUST00000208658 2891 ntBASIC20.75■□□□□ 0.91
Trim65Q8BFW4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim65Q8BFW4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim65Q8BFW4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim65Q8BFW4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim65Q8BFW4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim65Q8BFW4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim65Q8BFW4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Trim65Q8BFW4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim65Q8BFW4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Trim65Q8BFW4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Trim65Q8BFW4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim65Q8BFW4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.74■□□□□ 0.91
Trim65Q8BFW4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim65Q8BFW4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim65Q8BFW4 Smad6-203ENSMUST00000179458 273 ntBASIC20.74■□□□□ 0.91
Trim65Q8BFW4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.74■□□□□ 0.91
Trim65Q8BFW4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim65Q8BFW4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Trim65Q8BFW4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim65Q8BFW4 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.74■□□□□ 0.91
Trim65Q8BFW4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim65Q8BFW4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim65Q8BFW4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim65Q8BFW4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim65Q8BFW4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
Trim65Q8BFW4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim65Q8BFW4 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim65Q8BFW4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim65Q8BFW4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim65Q8BFW4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.73■□□□□ 0.91
Trim65Q8BFW4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.72■□□□□ 0.91
Trim65Q8BFW4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim65Q8BFW4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim65Q8BFW4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim65Q8BFW4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim65Q8BFW4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim65Q8BFW4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim65Q8BFW4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim65Q8BFW4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim65Q8BFW4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim65Q8BFW4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim65Q8BFW4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Trim65Q8BFW4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim65Q8BFW4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
Trim65Q8BFW4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim65Q8BFW4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim65Q8BFW4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim65Q8BFW4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim65Q8BFW4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim65Q8BFW4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim65Q8BFW4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim65Q8BFW4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim65Q8BFW4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim65Q8BFW4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim65Q8BFW4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.69■□□□□ 0.9
Trim65Q8BFW4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Trim65Q8BFW4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim65Q8BFW4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim65Q8BFW4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim65Q8BFW4 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.69■□□□□ 0.9
Trim65Q8BFW4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim65Q8BFW4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim65Q8BFW4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim65Q8BFW4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim65Q8BFW4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim65Q8BFW4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Trim65Q8BFW4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim65Q8BFW4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim65Q8BFW4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Trim65Q8BFW4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim65Q8BFW4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.68■□□□□ 0.9
Trim65Q8BFW4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim65Q8BFW4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim65Q8BFW4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim65Q8BFW4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim65Q8BFW4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim65Q8BFW4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim65Q8BFW4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms