Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Otop1Q80VM9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Otop1Q80VM9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Otop1Q80VM9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Otop1Q80VM9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Otop1Q80VM9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.57■□□□□ 0.56
Otop1Q80VM9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Otop1Q80VM9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Otop1Q80VM9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.57■□□□□ 0.56
Otop1Q80VM9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Otop1Q80VM9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Otop1Q80VM9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Otop1Q80VM9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Otop1Q80VM9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Otop1Q80VM9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Otop1Q80VM9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Otop1Q80VM9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Otop1Q80VM9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.56■□□□□ 0.56
Otop1Q80VM9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Otop1Q80VM9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Otop1Q80VM9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.56■□□□□ 0.56
Otop1Q80VM9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Otop1Q80VM9 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.56■□□□□ 0.56
Otop1Q80VM9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Otop1Q80VM9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Otop1Q80VM9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Otop1Q80VM9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Otop1Q80VM9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Otop1Q80VM9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Otop1Q80VM9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Otop1Q80VM9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Otop1Q80VM9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Otop1Q80VM9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Otop1Q80VM9 Gm7290-201ENSMUST00000104990 617 ntBASIC18.55■□□□□ 0.56
Otop1Q80VM9 Gm12918-201ENSMUST00000120234 636 ntBASIC18.55■□□□□ 0.56
Otop1Q80VM9 Gm15710-201ENSMUST00000121821 636 ntBASIC18.55■□□□□ 0.56
Otop1Q80VM9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Otop1Q80VM9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.55■□□□□ 0.56
Otop1Q80VM9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.55■□□□□ 0.56
Otop1Q80VM9 Gm5075-201ENSMUST00000196916 622 ntBASIC18.55■□□□□ 0.56
Otop1Q80VM9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.55■□□□□ 0.56
Otop1Q80VM9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Otop1Q80VM9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Otop1Q80VM9 Gm6365-201ENSMUST00000054711 744 ntBASIC18.55■□□□□ 0.56
Otop1Q80VM9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.55■□□□□ 0.56
Otop1Q80VM9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.55■□□□□ 0.56
Otop1Q80VM9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Otop1Q80VM9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Otop1Q80VM9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Otop1Q80VM9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Otop1Q80VM9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Otop1Q80VM9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Otop1Q80VM9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Otop1Q80VM9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Otop1Q80VM9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Otop1Q80VM9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
Otop1Q80VM9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Otop1Q80VM9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.54■□□□□ 0.56
Otop1Q80VM9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Otop1Q80VM9 Gm13168-201ENSMUST00000121771 632 ntBASIC18.54■□□□□ 0.56
Otop1Q80VM9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Otop1Q80VM9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Otop1Q80VM9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Otop1Q80VM9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Otop1Q80VM9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Otop1Q80VM9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Otop1Q80VM9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Otop1Q80VM9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Otop1Q80VM9 Mir7071-201ENSMUST00000184847 69 ntBASIC18.53■□□□□ 0.56
Otop1Q80VM9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Otop1Q80VM9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Otop1Q80VM9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Otop1Q80VM9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Otop1Q80VM9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Otop1Q80VM9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Otop1Q80VM9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Otop1Q80VM9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Otop1Q80VM9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Otop1Q80VM9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Otop1Q80VM9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Otop1Q80VM9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Otop1Q80VM9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.52■□□□□ 0.56
Otop1Q80VM9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Otop1Q80VM9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Otop1Q80VM9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Otop1Q80VM9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Otop1Q80VM9 Iqck-206ENSMUST00000208658 2891 ntBASIC18.52■□□□□ 0.55
Otop1Q80VM9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Otop1Q80VM9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Otop1Q80VM9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Otop1Q80VM9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Otop1Q80VM9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Otop1Q80VM9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Otop1Q80VM9 Gm13146-201ENSMUST00000118508 780 ntBASIC18.51■□□□□ 0.55
Otop1Q80VM9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.51■□□□□ 0.55
Otop1Q80VM9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Otop1Q80VM9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Otop1Q80VM9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Otop1Q80VM9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.51■□□□□ 0.55
Otop1Q80VM9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms