Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pif1Q80SX8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pif1Q80SX8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pif1Q80SX8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pif1Q80SX8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Pif1Q80SX8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pif1Q80SX8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pif1Q80SX8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.83■□□□□ 0.45
Pif1Q80SX8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Pif1Q80SX8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pif1Q80SX8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pif1Q80SX8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.83■□□□□ 0.44
Pif1Q80SX8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.83■□□□□ 0.44
Pif1Q80SX8 Mir5133-201ENSMUST00000174955 77 ntBASIC17.83■□□□□ 0.44
Pif1Q80SX8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pif1Q80SX8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pif1Q80SX8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pif1Q80SX8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pif1Q80SX8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pif1Q80SX8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Pif1Q80SX8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.82■□□□□ 0.44
Pif1Q80SX8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.82■□□□□ 0.44
Pif1Q80SX8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.82■□□□□ 0.44
Pif1Q80SX8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.82■□□□□ 0.44
Pif1Q80SX8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.82■□□□□ 0.44
Pif1Q80SX8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pif1Q80SX8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pif1Q80SX8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pif1Q80SX8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pif1Q80SX8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pif1Q80SX8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.81■□□□□ 0.44
Pif1Q80SX8 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pif1Q80SX8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pif1Q80SX8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pif1Q80SX8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Pif1Q80SX8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pif1Q80SX8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pif1Q80SX8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pif1Q80SX8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pif1Q80SX8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pif1Q80SX8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.81■□□□□ 0.44
Pif1Q80SX8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pif1Q80SX8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pif1Q80SX8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pif1Q80SX8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pif1Q80SX8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pif1Q80SX8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pif1Q80SX8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pif1Q80SX8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.8■□□□□ 0.44
Pif1Q80SX8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pif1Q80SX8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pif1Q80SX8 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pif1Q80SX8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pif1Q80SX8 Gm12441-201ENSMUST00000121806 588 ntBASIC17.8■□□□□ 0.44
Pif1Q80SX8 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.8■□□□□ 0.44
Pif1Q80SX8 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pif1Q80SX8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Pif1Q80SX8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pif1Q80SX8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pif1Q80SX8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
Pif1Q80SX8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pif1Q80SX8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.79■□□□□ 0.44
Pif1Q80SX8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pif1Q80SX8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.79■□□□□ 0.44
Pif1Q80SX8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pif1Q80SX8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pif1Q80SX8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pif1Q80SX8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pif1Q80SX8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pif1Q80SX8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pif1Q80SX8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pif1Q80SX8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.78■□□□□ 0.44
Pif1Q80SX8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pif1Q80SX8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pif1Q80SX8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pif1Q80SX8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pif1Q80SX8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pif1Q80SX8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pif1Q80SX8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pif1Q80SX8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pif1Q80SX8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pif1Q80SX8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Pif1Q80SX8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pif1Q80SX8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pif1Q80SX8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pif1Q80SX8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pif1Q80SX8 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pif1Q80SX8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pif1Q80SX8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Pif1Q80SX8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pif1Q80SX8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Pif1Q80SX8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pif1Q80SX8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pif1Q80SX8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pif1Q80SX8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pif1Q80SX8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pif1Q80SX8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pif1Q80SX8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pif1Q80SX8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pif1Q80SX8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms