Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn4bQ7M729 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.84■□□□□ 0.61
Scn4bQ7M729 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn4bQ7M729 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Scn4bQ7M729 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scn4bQ7M729 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scn4bQ7M729 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn4bQ7M729 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn4bQ7M729 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn4bQ7M729 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Scn4bQ7M729 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn4bQ7M729 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn4bQ7M729 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn4bQ7M729 Mir7075-201ENSMUST00000184187 82 ntBASIC18.83■□□□□ 0.6
Scn4bQ7M729 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.83■□□□□ 0.6
Scn4bQ7M729 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Scn4bQ7M729 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn4bQ7M729 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Scn4bQ7M729 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Scn4bQ7M729 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn4bQ7M729 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scn4bQ7M729 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Scn4bQ7M729 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Scn4bQ7M729 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn4bQ7M729 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Scn4bQ7M729 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn4bQ7M729 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn4bQ7M729 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Scn4bQ7M729 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn4bQ7M729 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn4bQ7M729 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn4bQ7M729 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn4bQ7M729 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn4bQ7M729 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn4bQ7M729 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scn4bQ7M729 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn4bQ7M729 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.81■□□□□ 0.6
Scn4bQ7M729 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn4bQ7M729 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn4bQ7M729 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn4bQ7M729 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn4bQ7M729 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn4bQ7M729 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Scn4bQ7M729 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn4bQ7M729 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scn4bQ7M729 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scn4bQ7M729 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scn4bQ7M729 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Scn4bQ7M729 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scn4bQ7M729 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn4bQ7M729 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scn4bQ7M729 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn4bQ7M729 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn4bQ7M729 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn4bQ7M729 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.8■□□□□ 0.6
Scn4bQ7M729 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Scn4bQ7M729 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn4bQ7M729 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scn4bQ7M729 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Scn4bQ7M729 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scn4bQ7M729 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Scn4bQ7M729 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.79■□□□□ 0.6
Scn4bQ7M729 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn4bQ7M729 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn4bQ7M729 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn4bQ7M729 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn4bQ7M729 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn4bQ7M729 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scn4bQ7M729 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn4bQ7M729 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn4bQ7M729 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn4bQ7M729 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn4bQ7M729 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn4bQ7M729 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Scn4bQ7M729 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn4bQ7M729 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.78■□□□□ 0.6
Scn4bQ7M729 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn4bQ7M729 Gm45417-201ENSMUST00000209533 758 ntBASIC18.78■□□□□ 0.6
Scn4bQ7M729 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn4bQ7M729 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn4bQ7M729 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn4bQ7M729 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn4bQ7M729 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Scn4bQ7M729 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn4bQ7M729 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn4bQ7M729 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn4bQ7M729 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.77■□□□□ 0.6
Scn4bQ7M729 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn4bQ7M729 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Scn4bQ7M729 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn4bQ7M729 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn4bQ7M729 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.77■□□□□ 0.6
Scn4bQ7M729 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.77■□□□□ 0.6
Scn4bQ7M729 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scn4bQ7M729 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scn4bQ7M729 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn4bQ7M729 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.76■□□□□ 0.59
Scn4bQ7M729 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Scn4bQ7M729 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.76■□□□□ 0.59
Scn4bQ7M729 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms