Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lsm8Q6ZWM4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lsm8Q6ZWM4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lsm8Q6ZWM4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Lsm8Q6ZWM4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lsm8Q6ZWM4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lsm8Q6ZWM4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Lsm8Q6ZWM4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
Lsm8Q6ZWM4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Lsm8Q6ZWM4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lsm8Q6ZWM4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lsm8Q6ZWM4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lsm8Q6ZWM4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lsm8Q6ZWM4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
Lsm8Q6ZWM4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lsm8Q6ZWM4 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
Lsm8Q6ZWM4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lsm8Q6ZWM4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Lsm8Q6ZWM4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lsm8Q6ZWM4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lsm8Q6ZWM4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lsm8Q6ZWM4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Lsm8Q6ZWM4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lsm8Q6ZWM4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lsm8Q6ZWM4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lsm8Q6ZWM4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lsm8Q6ZWM4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.32■□□□□ 0.84
Lsm8Q6ZWM4 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Lsm8Q6ZWM4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lsm8Q6ZWM4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.32■□□□□ 0.84
Lsm8Q6ZWM4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lsm8Q6ZWM4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Lsm8Q6ZWM4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lsm8Q6ZWM4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lsm8Q6ZWM4 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Lsm8Q6ZWM4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lsm8Q6ZWM4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lsm8Q6ZWM4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lsm8Q6ZWM4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lsm8Q6ZWM4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lsm8Q6ZWM4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lsm8Q6ZWM4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lsm8Q6ZWM4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lsm8Q6ZWM4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Lsm8Q6ZWM4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lsm8Q6ZWM4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.31■□□□□ 0.84
Lsm8Q6ZWM4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Lsm8Q6ZWM4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lsm8Q6ZWM4 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.31■□□□□ 0.84
Lsm8Q6ZWM4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lsm8Q6ZWM4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lsm8Q6ZWM4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lsm8Q6ZWM4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lsm8Q6ZWM4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Lsm8Q6ZWM4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lsm8Q6ZWM4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lsm8Q6ZWM4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lsm8Q6ZWM4 Gm26833-201ENSMUST00000180899 440 ntBASIC20.3■□□□□ 0.84
Lsm8Q6ZWM4 Gm43017-201ENSMUST00000198296 752 ntBASIC20.3■□□□□ 0.84
Lsm8Q6ZWM4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lsm8Q6ZWM4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lsm8Q6ZWM4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Lsm8Q6ZWM4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lsm8Q6ZWM4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lsm8Q6ZWM4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Lsm8Q6ZWM4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Lsm8Q6ZWM4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lsm8Q6ZWM4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
Lsm8Q6ZWM4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lsm8Q6ZWM4 Gm27801-201ENSMUST00000184174 223 ntBASIC20.28■□□□□ 0.84
Lsm8Q6ZWM4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lsm8Q6ZWM4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lsm8Q6ZWM4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lsm8Q6ZWM4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lsm8Q6ZWM4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lsm8Q6ZWM4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lsm8Q6ZWM4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Lsm8Q6ZWM4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lsm8Q6ZWM4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lsm8Q6ZWM4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Lsm8Q6ZWM4 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.27■□□□□ 0.84
Lsm8Q6ZWM4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lsm8Q6ZWM4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lsm8Q6ZWM4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lsm8Q6ZWM4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
Lsm8Q6ZWM4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
Lsm8Q6ZWM4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lsm8Q6ZWM4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.27■□□□□ 0.84
Lsm8Q6ZWM4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.27■□□□□ 0.84
Lsm8Q6ZWM4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.27■□□□□ 0.84
Lsm8Q6ZWM4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lsm8Q6ZWM4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Lsm8Q6ZWM4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lsm8Q6ZWM4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lsm8Q6ZWM4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lsm8Q6ZWM4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lsm8Q6ZWM4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lsm8Q6ZWM4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lsm8Q6ZWM4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Lsm8Q6ZWM4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms