Protein–RNA interactions for Protein: Q6QR59

Tcaf3, TRPM8 channel-associated factor 3, mousemouse

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcaf3Q6QR59 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tcaf3Q6QR59 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tcaf3Q6QR59 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Tcaf3Q6QR59 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Tcaf3Q6QR59 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.24■□□□□ 0.99
Tcaf3Q6QR59 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Tcaf3Q6QR59 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Tcaf3Q6QR59 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.24■□□□□ 0.99
Tcaf3Q6QR59 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tcaf3Q6QR59 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Tcaf3Q6QR59 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Tcaf3Q6QR59 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.24■□□□□ 0.99
Tcaf3Q6QR59 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tcaf3Q6QR59 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tcaf3Q6QR59 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tcaf3Q6QR59 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tcaf3Q6QR59 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tcaf3Q6QR59 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tcaf3Q6QR59 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tcaf3Q6QR59 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tcaf3Q6QR59 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Tcaf3Q6QR59 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tcaf3Q6QR59 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
Tcaf3Q6QR59 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Tcaf3Q6QR59 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tcaf3Q6QR59 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Tcaf3Q6QR59 Gm20760-201ENSMUST00000179197 648 ntBASIC21.23■□□□□ 0.99
Tcaf3Q6QR59 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tcaf3Q6QR59 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tcaf3Q6QR59 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tcaf3Q6QR59 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tcaf3Q6QR59 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tcaf3Q6QR59 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tcaf3Q6QR59 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Tcaf3Q6QR59 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tcaf3Q6QR59 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Tcaf3Q6QR59 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tcaf3Q6QR59 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.22■□□□□ 0.99
Tcaf3Q6QR59 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Tcaf3Q6QR59 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Tcaf3Q6QR59 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tcaf3Q6QR59 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Tcaf3Q6QR59 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tcaf3Q6QR59 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Tcaf3Q6QR59 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Tcaf3Q6QR59 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tcaf3Q6QR59 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tcaf3Q6QR59 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tcaf3Q6QR59 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.21■□□□□ 0.99
Tcaf3Q6QR59 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tcaf3Q6QR59 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Tcaf3Q6QR59 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tcaf3Q6QR59 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Tcaf3Q6QR59 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tcaf3Q6QR59 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tcaf3Q6QR59 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tcaf3Q6QR59 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Tcaf3Q6QR59 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tcaf3Q6QR59 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tcaf3Q6QR59 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Tcaf3Q6QR59 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
Tcaf3Q6QR59 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tcaf3Q6QR59 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Tcaf3Q6QR59 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tcaf3Q6QR59 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tcaf3Q6QR59 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Tcaf3Q6QR59 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tcaf3Q6QR59 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tcaf3Q6QR59 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.19■□□□□ 0.98
Tcaf3Q6QR59 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Tcaf3Q6QR59 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.19■□□□□ 0.98
Tcaf3Q6QR59 Gm10252-201ENSMUST00000209541 832 ntBASIC21.19■□□□□ 0.98
Tcaf3Q6QR59 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tcaf3Q6QR59 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Tcaf3Q6QR59 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.19■□□□□ 0.98
Tcaf3Q6QR59 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tcaf3Q6QR59 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
Tcaf3Q6QR59 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tcaf3Q6QR59 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tcaf3Q6QR59 Gm7290-201ENSMUST00000104990 617 ntBASIC21.18■□□□□ 0.98
Tcaf3Q6QR59 Gm12918-201ENSMUST00000120234 636 ntBASIC21.18■□□□□ 0.98
Tcaf3Q6QR59 Gm15710-201ENSMUST00000121821 636 ntBASIC21.18■□□□□ 0.98
Tcaf3Q6QR59 Gm5075-201ENSMUST00000196916 622 ntBASIC21.18■□□□□ 0.98
Tcaf3Q6QR59 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.18■□□□□ 0.98
Tcaf3Q6QR59 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.18■□□□□ 0.98
Tcaf3Q6QR59 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tcaf3Q6QR59 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tcaf3Q6QR59 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tcaf3Q6QR59 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Tcaf3Q6QR59 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tcaf3Q6QR59 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Tcaf3Q6QR59 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tcaf3Q6QR59 AA386476-201ENSMUST00000098781 1665 ntBASIC21.17■□□□□ 0.98
Tcaf3Q6QR59 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tcaf3Q6QR59 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tcaf3Q6QR59 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Tcaf3Q6QR59 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.17■□□□□ 0.98
Tcaf3Q6QR59 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.17■□□□□ 0.98
Tcaf3Q6QR59 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Tcaf3Q6QR59 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms