Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Scn10aQ6QIY3 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Scn10aQ6QIY3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Scn10aQ6QIY3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Scn10aQ6QIY3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC22.36■■□□□ 1.17
Scn10aQ6QIY3 Gm13509-201ENSMUST00000119733 1308 ntBASIC22.36■■□□□ 1.17
Scn10aQ6QIY3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Scn10aQ6QIY3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC22.36■■□□□ 1.17
Scn10aQ6QIY3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Scn10aQ6QIY3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.35■■□□□ 1.17
Scn10aQ6QIY3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Scn10aQ6QIY3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Scn10aQ6QIY3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Scn10aQ6QIY3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC22.34■■□□□ 1.17
Scn10aQ6QIY3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Scn10aQ6QIY3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scn10aQ6QIY3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC22.34■■□□□ 1.17
Scn10aQ6QIY3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC22.34■■□□□ 1.17
Scn10aQ6QIY3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Scn10aQ6QIY3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scn10aQ6QIY3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Scn10aQ6QIY3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Scn10aQ6QIY3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Scn10aQ6QIY3 Dio3-201ENSMUST00000097228 1449 ntBASIC22.33■■□□□ 1.17
Scn10aQ6QIY3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC22.33■■□□□ 1.17
Scn10aQ6QIY3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Scn10aQ6QIY3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Scn10aQ6QIY3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Scn10aQ6QIY3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Scn10aQ6QIY3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Scn10aQ6QIY3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Scn10aQ6QIY3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Scn10aQ6QIY3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC22.32■■□□□ 1.16
Scn10aQ6QIY3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
Scn10aQ6QIY3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC22.32■■□□□ 1.16
Scn10aQ6QIY3 Gm12896-201ENSMUST00000118430 226 ntBASIC22.32■■□□□ 1.16
Scn10aQ6QIY3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Scn10aQ6QIY3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Scn10aQ6QIY3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC22.32■■□□□ 1.16
Scn10aQ6QIY3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Scn10aQ6QIY3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Scn10aQ6QIY3 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Scn10aQ6QIY3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Scn10aQ6QIY3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Scn10aQ6QIY3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Scn10aQ6QIY3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC22.32■■□□□ 1.16
Scn10aQ6QIY3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC22.32■■□□□ 1.16
Scn10aQ6QIY3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Scn10aQ6QIY3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC22.32■■□□□ 1.16
Scn10aQ6QIY3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Scn10aQ6QIY3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Scn10aQ6QIY3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Scn10aQ6QIY3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Scn10aQ6QIY3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Scn10aQ6QIY3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Scn10aQ6QIY3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Scn10aQ6QIY3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC22.3■■□□□ 1.16
Scn10aQ6QIY3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC22.3■■□□□ 1.16
Scn10aQ6QIY3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC22.3■■□□□ 1.16
Scn10aQ6QIY3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Scn10aQ6QIY3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Scn10aQ6QIY3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Scn10aQ6QIY3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Scn10aQ6QIY3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Scn10aQ6QIY3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Scn10aQ6QIY3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Scn10aQ6QIY3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Scn10aQ6QIY3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Scn10aQ6QIY3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Scn10aQ6QIY3 Gm715-201ENSMUST00000117865 831 ntBASIC22.29■■□□□ 1.16
Scn10aQ6QIY3 Gm29994-201ENSMUST00000195495 1193 ntBASIC22.29■■□□□ 1.16
Scn10aQ6QIY3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Scn10aQ6QIY3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC22.29■■□□□ 1.16
Scn10aQ6QIY3 Gm32051-202ENSMUST00000197905 2385 ntBASIC22.29■■□□□ 1.16
Scn10aQ6QIY3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Scn10aQ6QIY3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Scn10aQ6QIY3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Scn10aQ6QIY3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Scn10aQ6QIY3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Scn10aQ6QIY3 Gm13836-201ENSMUST00000121159 501 ntBASIC22.29■■□□□ 1.16
Scn10aQ6QIY3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC22.29■■□□□ 1.16
Scn10aQ6QIY3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Scn10aQ6QIY3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Scn10aQ6QIY3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Scn10aQ6QIY3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Scn10aQ6QIY3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Scn10aQ6QIY3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Scn10aQ6QIY3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Scn10aQ6QIY3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC22.28■■□□□ 1.16
Scn10aQ6QIY3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Scn10aQ6QIY3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Scn10aQ6QIY3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Scn10aQ6QIY3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Scn10aQ6QIY3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Scn10aQ6QIY3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Scn10aQ6QIY3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Scn10aQ6QIY3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Scn10aQ6QIY3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Scn10aQ6QIY3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Scn10aQ6QIY3 Gm6802-201ENSMUST00000167843 1983 ntBASIC22.26■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms