Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Dhx40Q6PE54 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.54■■□□□ 1.04
Dhx40Q6PE54 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.54■■□□□ 1.04
Dhx40Q6PE54 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Dhx40Q6PE54 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Dhx40Q6PE54 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Dhx40Q6PE54 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Dhx40Q6PE54 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Dhx40Q6PE54 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Dhx40Q6PE54 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Dhx40Q6PE54 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.54■■□□□ 1.04
Dhx40Q6PE54 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Dhx40Q6PE54 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Dhx40Q6PE54 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Dhx40Q6PE54 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Dhx40Q6PE54 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Dhx40Q6PE54 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Dhx40Q6PE54 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Dhx40Q6PE54 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Dhx40Q6PE54 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Dhx40Q6PE54 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Dhx40Q6PE54 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Dhx40Q6PE54 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Dhx40Q6PE54 Fam105a-203ENSMUST00000226170 3043 ntBASIC21.53■■□□□ 1.04
Dhx40Q6PE54 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Dhx40Q6PE54 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Dhx40Q6PE54 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Dhx40Q6PE54 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Dhx40Q6PE54 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Dhx40Q6PE54 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Dhx40Q6PE54 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.52■■□□□ 1.04
Dhx40Q6PE54 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Dhx40Q6PE54 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Dhx40Q6PE54 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Dhx40Q6PE54 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Dhx40Q6PE54 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Dhx40Q6PE54 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Dhx40Q6PE54 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.52■■□□□ 1.04
Dhx40Q6PE54 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Dhx40Q6PE54 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Dhx40Q6PE54 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Dhx40Q6PE54 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Dhx40Q6PE54 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Dhx40Q6PE54 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Dhx40Q6PE54 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Dhx40Q6PE54 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Dhx40Q6PE54 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.51■■□□□ 1.03
Dhx40Q6PE54 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Dhx40Q6PE54 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Dhx40Q6PE54 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Dhx40Q6PE54 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Dhx40Q6PE54 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Dhx40Q6PE54 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC21.5■■□□□ 1.03
Dhx40Q6PE54 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
Dhx40Q6PE54 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.5■■□□□ 1.03
Dhx40Q6PE54 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Dhx40Q6PE54 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Dhx40Q6PE54 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Dhx40Q6PE54 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Dhx40Q6PE54 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Dhx40Q6PE54 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Dhx40Q6PE54 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.5■■□□□ 1.03
Dhx40Q6PE54 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Dhx40Q6PE54 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Dhx40Q6PE54 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Dhx40Q6PE54 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Dhx40Q6PE54 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Dhx40Q6PE54 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.49■■□□□ 1.03
Dhx40Q6PE54 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Dhx40Q6PE54 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Dhx40Q6PE54 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.49■■□□□ 1.03
Dhx40Q6PE54 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Dhx40Q6PE54 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Dhx40Q6PE54 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Dhx40Q6PE54 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Dhx40Q6PE54 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Dhx40Q6PE54 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Dhx40Q6PE54 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Dhx40Q6PE54 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
Dhx40Q6PE54 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Dhx40Q6PE54 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.48■■□□□ 1.03
Dhx40Q6PE54 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Dhx40Q6PE54 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
Dhx40Q6PE54 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Dhx40Q6PE54 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Dhx40Q6PE54 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Dhx40Q6PE54 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Dhx40Q6PE54 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Dhx40Q6PE54 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Dhx40Q6PE54 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Dhx40Q6PE54 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Dhx40Q6PE54 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Dhx40Q6PE54 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Dhx40Q6PE54 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Dhx40Q6PE54 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Dhx40Q6PE54 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.47■■□□□ 1.03
Dhx40Q6PE54 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.47■■□□□ 1.03
Dhx40Q6PE54 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
Dhx40Q6PE54 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Dhx40Q6PE54 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms