Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcd3Q6P9Z1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.72■□□□□ 0.43
Smarcd3Q6P9Z1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.72■□□□□ 0.43
Smarcd3Q6P9Z1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcd3Q6P9Z1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.72■□□□□ 0.43
Smarcd3Q6P9Z1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcd3Q6P9Z1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcd3Q6P9Z1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcd3Q6P9Z1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.72■□□□□ 0.43
Smarcd3Q6P9Z1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcd3Q6P9Z1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcd3Q6P9Z1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcd3Q6P9Z1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
Smarcd3Q6P9Z1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcd3Q6P9Z1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcd3Q6P9Z1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcd3Q6P9Z1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.71■□□□□ 0.43
Smarcd3Q6P9Z1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.71■□□□□ 0.43
Smarcd3Q6P9Z1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.71■□□□□ 0.43
Smarcd3Q6P9Z1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcd3Q6P9Z1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcd3Q6P9Z1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcd3Q6P9Z1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcd3Q6P9Z1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Smarcd3Q6P9Z1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcd3Q6P9Z1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcd3Q6P9Z1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcd3Q6P9Z1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcd3Q6P9Z1 Gm22238-201ENSMUST00000175222 88 ntBASIC17.7■□□□□ 0.42
Smarcd3Q6P9Z1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcd3Q6P9Z1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcd3Q6P9Z1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcd3Q6P9Z1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcd3Q6P9Z1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcd3Q6P9Z1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcd3Q6P9Z1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcd3Q6P9Z1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcd3Q6P9Z1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcd3Q6P9Z1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcd3Q6P9Z1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcd3Q6P9Z1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Smarcd3Q6P9Z1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcd3Q6P9Z1 Gm9959-201ENSMUST00000068277 390 ntBASIC17.69■□□□□ 0.42
Smarcd3Q6P9Z1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcd3Q6P9Z1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcd3Q6P9Z1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcd3Q6P9Z1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcd3Q6P9Z1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcd3Q6P9Z1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd3Q6P9Z1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd3Q6P9Z1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.68■□□□□ 0.42
Smarcd3Q6P9Z1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.68■□□□□ 0.42
Smarcd3Q6P9Z1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd3Q6P9Z1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd3Q6P9Z1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd3Q6P9Z1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd3Q6P9Z1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd3Q6P9Z1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd3Q6P9Z1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd3Q6P9Z1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd3Q6P9Z1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd3Q6P9Z1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd3Q6P9Z1 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.67■□□□□ 0.42
Smarcd3Q6P9Z1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.67■□□□□ 0.42
Smarcd3Q6P9Z1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.67■□□□□ 0.42
Smarcd3Q6P9Z1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd3Q6P9Z1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd3Q6P9Z1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.67■□□□□ 0.42
Smarcd3Q6P9Z1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd3Q6P9Z1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Smarcd3Q6P9Z1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd3Q6P9Z1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd3Q6P9Z1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd3Q6P9Z1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcd3Q6P9Z1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcd3Q6P9Z1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcd3Q6P9Z1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Smarcd3Q6P9Z1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcd3Q6P9Z1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.66■□□□□ 0.42
Smarcd3Q6P9Z1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.66■□□□□ 0.42
Smarcd3Q6P9Z1 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.66■□□□□ 0.42
Smarcd3Q6P9Z1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcd3Q6P9Z1 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.66■□□□□ 0.42
Smarcd3Q6P9Z1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcd3Q6P9Z1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcd3Q6P9Z1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcd3Q6P9Z1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.66■□□□□ 0.42
Smarcd3Q6P9Z1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcd3Q6P9Z1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcd3Q6P9Z1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.65■□□□□ 0.42
Smarcd3Q6P9Z1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd3Q6P9Z1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Smarcd3Q6P9Z1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.65■□□□□ 0.42
Smarcd3Q6P9Z1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Smarcd3Q6P9Z1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd3Q6P9Z1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Smarcd3Q6P9Z1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd3Q6P9Z1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd3Q6P9Z1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd3Q6P9Z1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms