Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sdc3Q64519 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sdc3Q64519 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.55■□□□□ 0.56
Sdc3Q64519 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Sdc3Q64519 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.55■□□□□ 0.56
Sdc3Q64519 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
Sdc3Q64519 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.55■□□□□ 0.56
Sdc3Q64519 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sdc3Q64519 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.55■□□□□ 0.56
Sdc3Q64519 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sdc3Q64519 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sdc3Q64519 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sdc3Q64519 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Sdc3Q64519 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sdc3Q64519 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sdc3Q64519 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.54■□□□□ 0.56
Sdc3Q64519 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Sdc3Q64519 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.54■□□□□ 0.56
Sdc3Q64519 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.54■□□□□ 0.56
Sdc3Q64519 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.54■□□□□ 0.56
Sdc3Q64519 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sdc3Q64519 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
Sdc3Q64519 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sdc3Q64519 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sdc3Q64519 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sdc3Q64519 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sdc3Q64519 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.53■□□□□ 0.56
Sdc3Q64519 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.53■□□□□ 0.56
Sdc3Q64519 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sdc3Q64519 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.53■□□□□ 0.56
Sdc3Q64519 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.53■□□□□ 0.56
Sdc3Q64519 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sdc3Q64519 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sdc3Q64519 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sdc3Q64519 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Sdc3Q64519 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sdc3Q64519 Gm10493-201ENSMUST00000097270 612 ntBASIC18.53■□□□□ 0.56
Sdc3Q64519 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sdc3Q64519 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sdc3Q64519 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sdc3Q64519 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sdc3Q64519 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sdc3Q64519 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sdc3Q64519 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sdc3Q64519 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
Sdc3Q64519 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sdc3Q64519 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sdc3Q64519 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sdc3Q64519 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Sdc3Q64519 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sdc3Q64519 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Sdc3Q64519 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Sdc3Q64519 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sdc3Q64519 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sdc3Q64519 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sdc3Q64519 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sdc3Q64519 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sdc3Q64519 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sdc3Q64519 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sdc3Q64519 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Sdc3Q64519 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sdc3Q64519 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Sdc3Q64519 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sdc3Q64519 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sdc3Q64519 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sdc3Q64519 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sdc3Q64519 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.5■□□□□ 0.55
Sdc3Q64519 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sdc3Q64519 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sdc3Q64519 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sdc3Q64519 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sdc3Q64519 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Sdc3Q64519 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sdc3Q64519 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.5■□□□□ 0.55
Sdc3Q64519 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.5■□□□□ 0.55
Sdc3Q64519 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sdc3Q64519 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sdc3Q64519 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sdc3Q64519 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sdc3Q64519 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Sdc3Q64519 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Sdc3Q64519 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Sdc3Q64519 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sdc3Q64519 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.49■□□□□ 0.55
Sdc3Q64519 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.49■□□□□ 0.55
Sdc3Q64519 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sdc3Q64519 Gm26571-201ENSMUST00000181399 666 ntBASIC18.49■□□□□ 0.55
Sdc3Q64519 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sdc3Q64519 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sdc3Q64519 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sdc3Q64519 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sdc3Q64519 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sdc3Q64519 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sdc3Q64519 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sdc3Q64519 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sdc3Q64519 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.49■□□□□ 0.55
Sdc3Q64519 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sdc3Q64519 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sdc3Q64519 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.48■□□□□ 0.55
Sdc3Q64519 Gm42642-201ENSMUST00000200683 355 ntBASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms