Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
AtmQ62388 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AtmQ62388 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
AtmQ62388 Gm11249-201ENSMUST00000117071 859 ntBASIC18.6■□□□□ 0.57
AtmQ62388 Gm6433-201ENSMUST00000118634 875 ntBASIC18.6■□□□□ 0.57
AtmQ62388 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AtmQ62388 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AtmQ62388 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AtmQ62388 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AtmQ62388 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.59■□□□□ 0.57
AtmQ62388 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
AtmQ62388 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AtmQ62388 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AtmQ62388 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AtmQ62388 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AtmQ62388 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AtmQ62388 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AtmQ62388 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
AtmQ62388 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AtmQ62388 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AtmQ62388 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.59■□□□□ 0.57
AtmQ62388 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AtmQ62388 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
AtmQ62388 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.58■□□□□ 0.57
AtmQ62388 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
AtmQ62388 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
AtmQ62388 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.58■□□□□ 0.56
AtmQ62388 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AtmQ62388 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
AtmQ62388 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AtmQ62388 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AtmQ62388 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.58■□□□□ 0.56
AtmQ62388 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AtmQ62388 Gm37055-201ENSMUST00000191866 133 ntBASIC18.58■□□□□ 0.56
AtmQ62388 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.58■□□□□ 0.56
AtmQ62388 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AtmQ62388 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
AtmQ62388 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AtmQ62388 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
AtmQ62388 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AtmQ62388 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
AtmQ62388 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
AtmQ62388 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AtmQ62388 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AtmQ62388 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AtmQ62388 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
AtmQ62388 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AtmQ62388 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.57■□□□□ 0.56
AtmQ62388 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AtmQ62388 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AtmQ62388 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AtmQ62388 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.56■□□□□ 0.56
AtmQ62388 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AtmQ62388 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AtmQ62388 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
AtmQ62388 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AtmQ62388 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AtmQ62388 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AtmQ62388 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
AtmQ62388 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AtmQ62388 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AtmQ62388 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AtmQ62388 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
AtmQ62388 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.55■□□□□ 0.56
AtmQ62388 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
AtmQ62388 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.55■□□□□ 0.56
AtmQ62388 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.55■□□□□ 0.56
AtmQ62388 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AtmQ62388 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
AtmQ62388 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AtmQ62388 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
AtmQ62388 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.55■□□□□ 0.56
AtmQ62388 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
AtmQ62388 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AtmQ62388 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.54■□□□□ 0.56
AtmQ62388 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
AtmQ62388 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AtmQ62388 Mir6236-201ENSMUST00000184437 123 ntBASIC18.54■□□□□ 0.56
AtmQ62388 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.54■□□□□ 0.56
AtmQ62388 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AtmQ62388 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.54■□□□□ 0.56
AtmQ62388 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.54■□□□□ 0.56
AtmQ62388 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AtmQ62388 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.54■□□□□ 0.56
AtmQ62388 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.54■□□□□ 0.56
AtmQ62388 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.54■□□□□ 0.56
AtmQ62388 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AtmQ62388 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AtmQ62388 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
AtmQ62388 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AtmQ62388 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.54■□□□□ 0.56
AtmQ62388 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
AtmQ62388 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.53■□□□□ 0.56
AtmQ62388 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AtmQ62388 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
AtmQ62388 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AtmQ62388 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.53■□□□□ 0.56
AtmQ62388 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.53■□□□□ 0.56
AtmQ62388 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AtmQ62388 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms