Protein–RNA interactions for Protein: Q62191

Trim21, E3 ubiquitin-protein ligase TRIM21, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim21Q62191 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.36■□□□□ 0.85
Trim21Q62191 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.36■□□□□ 0.85
Trim21Q62191 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.36■□□□□ 0.85
Trim21Q62191 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim21Q62191 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim21Q62191 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim21Q62191 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Trim21Q62191 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim21Q62191 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim21Q62191 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim21Q62191 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim21Q62191 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim21Q62191 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim21Q62191 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.35■□□□□ 0.85
Trim21Q62191 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.34■□□□□ 0.85
Trim21Q62191 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim21Q62191 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim21Q62191 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Trim21Q62191 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim21Q62191 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim21Q62191 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.33■□□□□ 0.85
Trim21Q62191 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trim21Q62191 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim21Q62191 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim21Q62191 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim21Q62191 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim21Q62191 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim21Q62191 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim21Q62191 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim21Q62191 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim21Q62191 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim21Q62191 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim21Q62191 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim21Q62191 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim21Q62191 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim21Q62191 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.32■□□□□ 0.84
Trim21Q62191 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim21Q62191 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim21Q62191 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Trim21Q62191 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.31■□□□□ 0.84
Trim21Q62191 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim21Q62191 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trim21Q62191 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim21Q62191 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim21Q62191 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Trim21Q62191 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.3■□□□□ 0.84
Trim21Q62191 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.3■□□□□ 0.84
Trim21Q62191 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim21Q62191 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim21Q62191 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim21Q62191 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim21Q62191 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim21Q62191 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim21Q62191 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim21Q62191 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.29■□□□□ 0.84
Trim21Q62191 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Trim21Q62191 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim21Q62191 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.29■□□□□ 0.84
Trim21Q62191 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.29■□□□□ 0.84
Trim21Q62191 Gm9847-201ENSMUST00000052528 599 ntBASIC20.29■□□□□ 0.84
Trim21Q62191 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim21Q62191 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim21Q62191 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim21Q62191 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim21Q62191 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim21Q62191 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim21Q62191 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim21Q62191 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trim21Q62191 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim21Q62191 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Trim21Q62191 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim21Q62191 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim21Q62191 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim21Q62191 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim21Q62191 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Trim21Q62191 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim21Q62191 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim21Q62191 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim21Q62191 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim21Q62191 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim21Q62191 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim21Q62191 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim21Q62191 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Trim21Q62191 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim21Q62191 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim21Q62191 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim21Q62191 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim21Q62191 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim21Q62191 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim21Q62191 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.27■□□□□ 0.84
Trim21Q62191 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim21Q62191 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim21Q62191 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim21Q62191 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim21Q62191 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim21Q62191 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim21Q62191 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim21Q62191 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim21Q62191 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim21Q62191 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms