Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SspnQ62147 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SspnQ62147 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SspnQ62147 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.16■□□□□ 0.18
SspnQ62147 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SspnQ62147 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SspnQ62147 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SspnQ62147 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SspnQ62147 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SspnQ62147 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SspnQ62147 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SspnQ62147 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SspnQ62147 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SspnQ62147 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.15■□□□□ 0.18
SspnQ62147 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SspnQ62147 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SspnQ62147 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.15■□□□□ 0.18
SspnQ62147 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SspnQ62147 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.15■□□□□ 0.18
SspnQ62147 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
SspnQ62147 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
SspnQ62147 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
SspnQ62147 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SspnQ62147 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SspnQ62147 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SspnQ62147 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SspnQ62147 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.14■□□□□ 0.17
SspnQ62147 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SspnQ62147 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SspnQ62147 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SspnQ62147 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SspnQ62147 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SspnQ62147 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
SspnQ62147 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.13■□□□□ 0.17
SspnQ62147 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.13■□□□□ 0.17
SspnQ62147 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SspnQ62147 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SspnQ62147 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.13■□□□□ 0.17
SspnQ62147 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.13■□□□□ 0.17
SspnQ62147 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SspnQ62147 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SspnQ62147 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SspnQ62147 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SspnQ62147 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SspnQ62147 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SspnQ62147 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SspnQ62147 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SspnQ62147 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SspnQ62147 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SspnQ62147 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SspnQ62147 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SspnQ62147 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.12■□□□□ 0.17
SspnQ62147 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.12■□□□□ 0.17
SspnQ62147 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.12■□□□□ 0.17
SspnQ62147 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SspnQ62147 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SspnQ62147 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SspnQ62147 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SspnQ62147 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SspnQ62147 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SspnQ62147 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SspnQ62147 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
SspnQ62147 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SspnQ62147 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SspnQ62147 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SspnQ62147 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SspnQ62147 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SspnQ62147 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.11■□□□□ 0.17
SspnQ62147 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SspnQ62147 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SspnQ62147 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.11■□□□□ 0.17
SspnQ62147 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SspnQ62147 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.1■□□□□ 0.17
SspnQ62147 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SspnQ62147 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SspnQ62147 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SspnQ62147 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SspnQ62147 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SspnQ62147 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
SspnQ62147 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.1■□□□□ 0.17
SspnQ62147 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SspnQ62147 Golgb1-201ENSMUST00000023534 498 ntBASIC16.1■□□□□ 0.17
SspnQ62147 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SspnQ62147 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SspnQ62147 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SspnQ62147 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SspnQ62147 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SspnQ62147 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SspnQ62147 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SspnQ62147 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SspnQ62147 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.09■□□□□ 0.17
SspnQ62147 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SspnQ62147 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
SspnQ62147 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SspnQ62147 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SspnQ62147 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.09■□□□□ 0.17
SspnQ62147 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SspnQ62147 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SspnQ62147 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SspnQ62147 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms