Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Notch3Q61982 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Notch3Q61982 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Notch3Q61982 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Notch3Q61982 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Notch3Q61982 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Notch3Q61982 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Notch3Q61982 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Notch3Q61982 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Notch3Q61982 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Notch3Q61982 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Notch3Q61982 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Notch3Q61982 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Notch3Q61982 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.77□□□□□ -0.05
Notch3Q61982 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.77□□□□□ -0.05
Notch3Q61982 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Notch3Q61982 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Notch3Q61982 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Notch3Q61982 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.76□□□□□ -0.05
Notch3Q61982 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Notch3Q61982 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Notch3Q61982 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Notch3Q61982 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Notch3Q61982 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Notch3Q61982 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC14.76□□□□□ -0.05
Notch3Q61982 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Notch3Q61982 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Notch3Q61982 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Notch3Q61982 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Notch3Q61982 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Notch3Q61982 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Notch3Q61982 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Notch3Q61982 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Notch3Q61982 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.75□□□□□ -0.05
Notch3Q61982 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.75□□□□□ -0.05
Notch3Q61982 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.75□□□□□ -0.05
Notch3Q61982 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Notch3Q61982 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Notch3Q61982 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Notch3Q61982 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Notch3Q61982 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Notch3Q61982 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Notch3Q61982 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Notch3Q61982 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Notch3Q61982 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.75□□□□□ -0.05
Notch3Q61982 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Notch3Q61982 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.75□□□□□ -0.05
Notch3Q61982 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Notch3Q61982 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Notch3Q61982 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Notch3Q61982 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Notch3Q61982 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC14.74□□□□□ -0.05
Notch3Q61982 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Notch3Q61982 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Notch3Q61982 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Notch3Q61982 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Notch3Q61982 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.74□□□□□ -0.05
Notch3Q61982 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Notch3Q61982 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Notch3Q61982 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Notch3Q61982 Gm13148-201ENSMUST00000118892 745 ntBASIC14.74□□□□□ -0.05
Notch3Q61982 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Notch3Q61982 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.74□□□□□ -0.05
Notch3Q61982 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Notch3Q61982 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.74□□□□□ -0.05
Notch3Q61982 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Notch3Q61982 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Notch3Q61982 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Notch3Q61982 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Notch3Q61982 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Notch3Q61982 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Notch3Q61982 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Notch3Q61982 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Notch3Q61982 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Notch3Q61982 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Notch3Q61982 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Notch3Q61982 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Notch3Q61982 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Notch3Q61982 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Notch3Q61982 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Notch3Q61982 Gm12527-201ENSMUST00000117967 564 ntBASIC14.72□□□□□ -0.05
Notch3Q61982 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Notch3Q61982 Gm27801-201ENSMUST00000184174 223 ntBASIC14.72□□□□□ -0.05
Notch3Q61982 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Notch3Q61982 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Notch3Q61982 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Notch3Q61982 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Notch3Q61982 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Notch3Q61982 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Notch3Q61982 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Notch3Q61982 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Notch3Q61982 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Notch3Q61982 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Notch3Q61982 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Notch3Q61982 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Notch3Q61982 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Notch3Q61982 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Notch3Q61982 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Notch3Q61982 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Notch3Q61982 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms