Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Foxn1Q61575 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Foxn1Q61575 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC22.28■■□□□ 1.16
Foxn1Q61575 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Foxn1Q61575 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC22.28■■□□□ 1.16
Foxn1Q61575 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
Foxn1Q61575 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Foxn1Q61575 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC22.28■■□□□ 1.16
Foxn1Q61575 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Foxn1Q61575 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Foxn1Q61575 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.28■■□□□ 1.16
Foxn1Q61575 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Foxn1Q61575 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Foxn1Q61575 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC22.27■■□□□ 1.16
Foxn1Q61575 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Foxn1Q61575 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Foxn1Q61575 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Foxn1Q61575 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC22.27■■□□□ 1.16
Foxn1Q61575 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Foxn1Q61575 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Foxn1Q61575 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Foxn1Q61575 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Foxn1Q61575 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC22.26■■□□□ 1.15
Foxn1Q61575 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Foxn1Q61575 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Foxn1Q61575 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC22.26■■□□□ 1.15
Foxn1Q61575 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC22.26■■□□□ 1.15
Foxn1Q61575 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Foxn1Q61575 Gm10819-201ENSMUST00000099988 561 ntBASIC22.26■■□□□ 1.15
Foxn1Q61575 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC22.26■■□□□ 1.15
Foxn1Q61575 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Foxn1Q61575 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Foxn1Q61575 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.25■■□□□ 1.15
Foxn1Q61575 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Foxn1Q61575 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Foxn1Q61575 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
Foxn1Q61575 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC22.25■■□□□ 1.15
Foxn1Q61575 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Foxn1Q61575 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Foxn1Q61575 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Foxn1Q61575 Gm2559-201ENSMUST00000201323 363 ntBASIC22.25■■□□□ 1.15
Foxn1Q61575 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Foxn1Q61575 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Foxn1Q61575 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Foxn1Q61575 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC22.24■■□□□ 1.15
Foxn1Q61575 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Foxn1Q61575 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Foxn1Q61575 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC22.24■■□□□ 1.15
Foxn1Q61575 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Foxn1Q61575 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Foxn1Q61575 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.23■■□□□ 1.15
Foxn1Q61575 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Foxn1Q61575 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Foxn1Q61575 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Foxn1Q61575 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Foxn1Q61575 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Foxn1Q61575 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
Foxn1Q61575 AC153881.2-201ENSMUST00000214877 204 ntBASIC22.23■■□□□ 1.15
Foxn1Q61575 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Foxn1Q61575 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Foxn1Q61575 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Foxn1Q61575 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Foxn1Q61575 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.23■■□□□ 1.15
Foxn1Q61575 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Foxn1Q61575 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC22.22■■□□□ 1.15
Foxn1Q61575 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Foxn1Q61575 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Foxn1Q61575 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Foxn1Q61575 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Foxn1Q61575 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Foxn1Q61575 Gm5913-201ENSMUST00000119397 1399 ntBASIC22.22■■□□□ 1.15
Foxn1Q61575 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Foxn1Q61575 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Foxn1Q61575 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Foxn1Q61575 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Foxn1Q61575 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Foxn1Q61575 Gm10698-201ENSMUST00000182663 604 ntBASIC22.21■■□□□ 1.15
Foxn1Q61575 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Foxn1Q61575 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Foxn1Q61575 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Foxn1Q61575 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Foxn1Q61575 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
Foxn1Q61575 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Foxn1Q61575 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC22.2■■□□□ 1.14
Foxn1Q61575 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Foxn1Q61575 Dio3-201ENSMUST00000097228 1449 ntBASIC22.2■■□□□ 1.14
Foxn1Q61575 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Foxn1Q61575 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Foxn1Q61575 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Foxn1Q61575 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Foxn1Q61575 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC22.19■■□□□ 1.14
Foxn1Q61575 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Foxn1Q61575 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Foxn1Q61575 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Foxn1Q61575 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Foxn1Q61575 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Foxn1Q61575 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC22.19■■□□□ 1.14
Foxn1Q61575 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Foxn1Q61575 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Foxn1Q61575 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms