Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox17Q61473 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.17■□□□□ 0.5
Sox17Q61473 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox17Q61473 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Sox17Q61473 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox17Q61473 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox17Q61473 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox17Q61473 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox17Q61473 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox17Q61473 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox17Q61473 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox17Q61473 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
Sox17Q61473 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox17Q61473 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox17Q61473 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.16■□□□□ 0.5
Sox17Q61473 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.16■□□□□ 0.5
Sox17Q61473 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox17Q61473 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox17Q61473 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox17Q61473 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sox17Q61473 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.16■□□□□ 0.5
Sox17Q61473 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sox17Q61473 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.15■□□□□ 0.5
Sox17Q61473 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.15■□□□□ 0.5
Sox17Q61473 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sox17Q61473 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sox17Q61473 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sox17Q61473 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Sox17Q61473 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sox17Q61473 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Sox17Q61473 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.14■□□□□ 0.49
Sox17Q61473 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.14■□□□□ 0.49
Sox17Q61473 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sox17Q61473 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.14■□□□□ 0.49
Sox17Q61473 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.14■□□□□ 0.49
Sox17Q61473 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Sox17Q61473 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sox17Q61473 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sox17Q61473 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sox17Q61473 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sox17Q61473 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox17Q61473 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox17Q61473 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.13■□□□□ 0.49
Sox17Q61473 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Sox17Q61473 Grk6-206ENSMUST00000224995 2971 ntBASIC18.13■□□□□ 0.49
Sox17Q61473 BC021767-201ENSMUST00000126387 1716 ntBASIC18.13■□□□□ 0.49
Sox17Q61473 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox17Q61473 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.13■□□□□ 0.49
Sox17Q61473 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Sox17Q61473 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Sox17Q61473 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox17Q61473 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox17Q61473 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox17Q61473 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox17Q61473 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox17Q61473 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.12■□□□□ 0.49
Sox17Q61473 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Sox17Q61473 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sox17Q61473 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.12■□□□□ 0.49
Sox17Q61473 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox17Q61473 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox17Q61473 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sox17Q61473 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox17Q61473 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Sox17Q61473 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox17Q61473 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox17Q61473 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Sox17Q61473 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox17Q61473 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox17Q61473 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox17Q61473 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.11■□□□□ 0.49
Sox17Q61473 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.11■□□□□ 0.49
Sox17Q61473 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.11■□□□□ 0.49
Sox17Q61473 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox17Q61473 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox17Q61473 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox17Q61473 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox17Q61473 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox17Q61473 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox17Q61473 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox17Q61473 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox17Q61473 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sox17Q61473 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox17Q61473 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox17Q61473 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sox17Q61473 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox17Q61473 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Sox17Q61473 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.1■□□□□ 0.49
Sox17Q61473 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.1■□□□□ 0.49
Sox17Q61473 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox17Q61473 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.1■□□□□ 0.49
Sox17Q61473 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox17Q61473 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sox17Q61473 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sox17Q61473 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sox17Q61473 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox17Q61473 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sox17Q61473 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.09■□□□□ 0.49
Sox17Q61473 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Sox17Q61473 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms