Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Clcn4Q61418 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clcn4Q61418 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Clcn4Q61418 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clcn4Q61418 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Clcn4Q61418 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.76■□□□□ 0.43
Clcn4Q61418 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.76■□□□□ 0.43
Clcn4Q61418 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn4Q61418 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn4Q61418 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.76■□□□□ 0.43
Clcn4Q61418 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn4Q61418 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn4Q61418 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn4Q61418 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn4Q61418 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn4Q61418 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.75■□□□□ 0.43
Clcn4Q61418 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Clcn4Q61418 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn4Q61418 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Clcn4Q61418 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn4Q61418 Serp2-204ENSMUST00000228055 705 ntBASIC17.75■□□□□ 0.43
Clcn4Q61418 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn4Q61418 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.75■□□□□ 0.43
Clcn4Q61418 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn4Q61418 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn4Q61418 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn4Q61418 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn4Q61418 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn4Q61418 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn4Q61418 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn4Q61418 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.74■□□□□ 0.43
Clcn4Q61418 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Clcn4Q61418 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.74■□□□□ 0.43
Clcn4Q61418 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn4Q61418 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn4Q61418 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.74■□□□□ 0.43
Clcn4Q61418 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn4Q61418 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn4Q61418 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn4Q61418 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn4Q61418 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn4Q61418 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn4Q61418 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn4Q61418 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.73■□□□□ 0.43
Clcn4Q61418 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn4Q61418 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Clcn4Q61418 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Clcn4Q61418 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Clcn4Q61418 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn4Q61418 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Clcn4Q61418 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Clcn4Q61418 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Clcn4Q61418 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.73■□□□□ 0.43
Clcn4Q61418 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn4Q61418 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn4Q61418 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn4Q61418 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn4Q61418 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn4Q61418 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.71■□□□□ 0.43
Clcn4Q61418 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn4Q61418 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn4Q61418 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Clcn4Q61418 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn4Q61418 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn4Q61418 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.71■□□□□ 0.43
Clcn4Q61418 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn4Q61418 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn4Q61418 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Clcn4Q61418 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Clcn4Q61418 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Clcn4Q61418 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Clcn4Q61418 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn4Q61418 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn4Q61418 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn4Q61418 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Clcn4Q61418 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn4Q61418 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn4Q61418 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn4Q61418 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn4Q61418 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn4Q61418 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn4Q61418 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.7■□□□□ 0.42
Clcn4Q61418 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Clcn4Q61418 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn4Q61418 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn4Q61418 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn4Q61418 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clcn4Q61418 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Clcn4Q61418 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.69■□□□□ 0.42
Clcn4Q61418 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Clcn4Q61418 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Clcn4Q61418 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn4Q61418 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn4Q61418 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.69■□□□□ 0.42
Clcn4Q61418 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.69■□□□□ 0.42
Clcn4Q61418 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn4Q61418 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn4Q61418 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn4Q61418 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn4Q61418 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms