Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Hcfc1Q61191 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hcfc1Q61191 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hcfc1Q61191 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hcfc1Q61191 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.47■□□□□ 0.23
Hcfc1Q61191 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hcfc1Q61191 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.46■□□□□ 0.23
Hcfc1Q61191 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Hcfc1Q61191 Gm7860-201ENSMUST00000121190 879 ntBASIC16.46■□□□□ 0.23
Hcfc1Q61191 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Hcfc1Q61191 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Hcfc1Q61191 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Hcfc1Q61191 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.46■□□□□ 0.22
Hcfc1Q61191 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hcfc1Q61191 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hcfc1Q61191 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.45■□□□□ 0.22
Hcfc1Q61191 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.45■□□□□ 0.22
Hcfc1Q61191 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hcfc1Q61191 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hcfc1Q61191 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Hcfc1Q61191 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hcfc1Q61191 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hcfc1Q61191 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hcfc1Q61191 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hcfc1Q61191 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hcfc1Q61191 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hcfc1Q61191 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hcfc1Q61191 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.45■□□□□ 0.22
Hcfc1Q61191 Gm5643-201ENSMUST00000117081 966 ntBASIC16.45■□□□□ 0.22
Hcfc1Q61191 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Hcfc1Q61191 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hcfc1Q61191 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hcfc1Q61191 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hcfc1Q61191 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hcfc1Q61191 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC16.44■□□□□ 0.22
Hcfc1Q61191 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.44■□□□□ 0.22
Hcfc1Q61191 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hcfc1Q61191 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hcfc1Q61191 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hcfc1Q61191 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Hcfc1Q61191 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.43■□□□□ 0.22
Hcfc1Q61191 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hcfc1Q61191 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hcfc1Q61191 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Hcfc1Q61191 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Hcfc1Q61191 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Hcfc1Q61191 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Hcfc1Q61191 Gm27275-201ENSMUST00000184318 272 ntBASIC16.43■□□□□ 0.22
Hcfc1Q61191 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.43■□□□□ 0.22
Hcfc1Q61191 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.43■□□□□ 0.22
Hcfc1Q61191 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hcfc1Q61191 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hcfc1Q61191 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hcfc1Q61191 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hcfc1Q61191 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hcfc1Q61191 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.42■□□□□ 0.22
Hcfc1Q61191 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hcfc1Q61191 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hcfc1Q61191 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hcfc1Q61191 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.41■□□□□ 0.22
Hcfc1Q61191 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.41■□□□□ 0.22
Hcfc1Q61191 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hcfc1Q61191 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Hcfc1Q61191 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hcfc1Q61191 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hcfc1Q61191 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hcfc1Q61191 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hcfc1Q61191 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hcfc1Q61191 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Hcfc1Q61191 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hcfc1Q61191 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hcfc1Q61191 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Hcfc1Q61191 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.41■□□□□ 0.22
Hcfc1Q61191 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hcfc1Q61191 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hcfc1Q61191 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hcfc1Q61191 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hcfc1Q61191 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.4■□□□□ 0.22
Hcfc1Q61191 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Hcfc1Q61191 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hcfc1Q61191 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Hcfc1Q61191 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hcfc1Q61191 Mir6982-201ENSMUST00000184354 68 ntBASIC16.4■□□□□ 0.22
Hcfc1Q61191 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hcfc1Q61191 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hcfc1Q61191 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.4■□□□□ 0.22
Hcfc1Q61191 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hcfc1Q61191 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hcfc1Q61191 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Hcfc1Q61191 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hcfc1Q61191 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.39■□□□□ 0.22
Hcfc1Q61191 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
Hcfc1Q61191 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hcfc1Q61191 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.39■□□□□ 0.21
Hcfc1Q61191 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hcfc1Q61191 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hcfc1Q61191 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hcfc1Q61191 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hcfc1Q61191 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hcfc1Q61191 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms