Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.24■□□□□ 0.67
Sim1Q61045 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sim1Q61045 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sim1Q61045 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sim1Q61045 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sim1Q61045 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sim1Q61045 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sim1Q61045 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Sim1Q61045 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.23■□□□□ 0.67
Sim1Q61045 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.23■□□□□ 0.67
Sim1Q61045 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sim1Q61045 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Sim1Q61045 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.23■□□□□ 0.67
Sim1Q61045 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.23■□□□□ 0.67
Sim1Q61045 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sim1Q61045 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Sim1Q61045 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.23■□□□□ 0.67
Sim1Q61045 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sim1Q61045 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sim1Q61045 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Sim1Q61045 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Sim1Q61045 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Sim1Q61045 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sim1Q61045 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Sim1Q61045 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.22■□□□□ 0.67
Sim1Q61045 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Sim1Q61045 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sim1Q61045 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.22■□□□□ 0.67
Sim1Q61045 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Sim1Q61045 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sim1Q61045 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sim1Q61045 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sim1Q61045 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.22■□□□□ 0.67
Sim1Q61045 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Sim1Q61045 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Sim1Q61045 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.21■□□□□ 0.67
Sim1Q61045 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sim1Q61045 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sim1Q61045 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sim1Q61045 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sim1Q61045 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sim1Q61045 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.21■□□□□ 0.67
Sim1Q61045 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.21■□□□□ 0.67
Sim1Q61045 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Sim1Q61045 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sim1Q61045 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Sim1Q61045 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sim1Q61045 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.21■□□□□ 0.67
Sim1Q61045 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sim1Q61045 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Sim1Q61045 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sim1Q61045 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sim1Q61045 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sim1Q61045 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.2■□□□□ 0.66
Sim1Q61045 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Sim1Q61045 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sim1Q61045 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sim1Q61045 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sim1Q61045 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Sim1Q61045 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Sim1Q61045 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.19■□□□□ 0.66
Sim1Q61045 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sim1Q61045 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Sim1Q61045 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Sim1Q61045 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sim1Q61045 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sim1Q61045 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sim1Q61045 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sim1Q61045 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sim1Q61045 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sim1Q61045 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sim1Q61045 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sim1Q61045 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sim1Q61045 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Sim1Q61045 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.18■□□□□ 0.66
Sim1Q61045 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sim1Q61045 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sim1Q61045 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sim1Q61045 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sim1Q61045 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sim1Q61045 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.18■□□□□ 0.66
Sim1Q61045 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sim1Q61045 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sim1Q61045 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sim1Q61045 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sim1Q61045 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sim1Q61045 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sim1Q61045 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Sim1Q61045 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sim1Q61045 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sim1Q61045 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sim1Q61045 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sim1Q61045 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sim1Q61045 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
Sim1Q61045 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sim1Q61045 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sim1Q61045 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sim1Q61045 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.16■□□□□ 0.66
Sim1Q61045 Gm12441-201ENSMUST00000121806 588 ntBASIC19.16■□□□□ 0.66
Sim1Q61045 Gm10653-202ENSMUST00000139570 835 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms