Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.99■□□□□ 0.79
Satb1Q60611 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Satb1Q60611 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Satb1Q60611 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Satb1Q60611 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Satb1Q60611 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Satb1Q60611 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Satb1Q60611 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Satb1Q60611 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.98■□□□□ 0.79
Satb1Q60611 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Satb1Q60611 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Satb1Q60611 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Satb1Q60611 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Satb1Q60611 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Satb1Q60611 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Satb1Q60611 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Satb1Q60611 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Satb1Q60611 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Satb1Q60611 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Satb1Q60611 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Satb1Q60611 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Satb1Q60611 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.97■□□□□ 0.79
Satb1Q60611 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Satb1Q60611 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Satb1Q60611 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.97■□□□□ 0.79
Satb1Q60611 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Satb1Q60611 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.97■□□□□ 0.79
Satb1Q60611 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Satb1Q60611 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Satb1Q60611 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.97■□□□□ 0.79
Satb1Q60611 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Satb1Q60611 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Satb1Q60611 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.97■□□□□ 0.79
Satb1Q60611 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Satb1Q60611 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Satb1Q60611 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Satb1Q60611 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Satb1Q60611 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.96■□□□□ 0.79
Satb1Q60611 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.96■□□□□ 0.79
Satb1Q60611 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.96■□□□□ 0.79
Satb1Q60611 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Satb1Q60611 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Satb1Q60611 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Satb1Q60611 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Satb1Q60611 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Satb1Q60611 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Satb1Q60611 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Satb1Q60611 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Satb1Q60611 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Satb1Q60611 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Satb1Q60611 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.95■□□□□ 0.78
Satb1Q60611 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Satb1Q60611 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Satb1Q60611 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Satb1Q60611 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Satb1Q60611 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Satb1Q60611 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Satb1Q60611 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Satb1Q60611 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Satb1Q60611 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.94■□□□□ 0.78
Satb1Q60611 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.94■□□□□ 0.78
Satb1Q60611 Gm5408-201ENSMUST00000197998 747 ntBASIC19.94■□□□□ 0.78
Satb1Q60611 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Satb1Q60611 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.94■□□□□ 0.78
Satb1Q60611 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Satb1Q60611 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Satb1Q60611 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Satb1Q60611 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Satb1Q60611 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.94■□□□□ 0.78
Satb1Q60611 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Satb1Q60611 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Satb1Q60611 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.93■□□□□ 0.78
Satb1Q60611 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.93■□□□□ 0.78
Satb1Q60611 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.93■□□□□ 0.78
Satb1Q60611 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Satb1Q60611 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Satb1Q60611 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Satb1Q60611 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Satb1Q60611 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Satb1Q60611 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Satb1Q60611 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Satb1Q60611 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Satb1Q60611 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Satb1Q60611 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Satb1Q60611 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Satb1Q60611 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Satb1Q60611 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Satb1Q60611 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Satb1Q60611 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Satb1Q60611 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Satb1Q60611 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Satb1Q60611 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Satb1Q60611 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Satb1Q60611 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.91■□□□□ 0.78
Satb1Q60611 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Satb1Q60611 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Satb1Q60611 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Satb1Q60611 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Satb1Q60611 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Satb1Q60611 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms