Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Atp13a4Q5XF90 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atp13a4Q5XF90 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atp13a4Q5XF90 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atp13a4Q5XF90 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atp13a4Q5XF90 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Atp13a4Q5XF90 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Atp13a4Q5XF90 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.97■□□□□ 0.95
Atp13a4Q5XF90 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Atp13a4Q5XF90 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atp13a4Q5XF90 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Atp13a4Q5XF90 Iqck-206ENSMUST00000208658 2891 ntBASIC20.97■□□□□ 0.95
Atp13a4Q5XF90 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atp13a4Q5XF90 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Atp13a4Q5XF90 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atp13a4Q5XF90 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atp13a4Q5XF90 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atp13a4Q5XF90 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atp13a4Q5XF90 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Atp13a4Q5XF90 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
Atp13a4Q5XF90 Gm11421-201ENSMUST00000122124 294 ntBASIC20.96■□□□□ 0.95
Atp13a4Q5XF90 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.96■□□□□ 0.95
Atp13a4Q5XF90 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.96■□□□□ 0.95
Atp13a4Q5XF90 Gm40848-201ENSMUST00000221998 324 ntBASIC20.96■□□□□ 0.95
Atp13a4Q5XF90 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atp13a4Q5XF90 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atp13a4Q5XF90 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atp13a4Q5XF90 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.95■□□□□ 0.95
Atp13a4Q5XF90 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
Atp13a4Q5XF90 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atp13a4Q5XF90 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atp13a4Q5XF90 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.95■□□□□ 0.94
Atp13a4Q5XF90 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.95■□□□□ 0.94
Atp13a4Q5XF90 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atp13a4Q5XF90 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.94■□□□□ 0.94
Atp13a4Q5XF90 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Atp13a4Q5XF90 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atp13a4Q5XF90 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atp13a4Q5XF90 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Atp13a4Q5XF90 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Atp13a4Q5XF90 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atp13a4Q5XF90 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.94■□□□□ 0.94
Atp13a4Q5XF90 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atp13a4Q5XF90 Gm26833-201ENSMUST00000180899 440 ntBASIC20.94■□□□□ 0.94
Atp13a4Q5XF90 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atp13a4Q5XF90 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Atp13a4Q5XF90 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Atp13a4Q5XF90 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Atp13a4Q5XF90 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atp13a4Q5XF90 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atp13a4Q5XF90 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.93■□□□□ 0.94
Atp13a4Q5XF90 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Atp13a4Q5XF90 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.93■□□□□ 0.94
Atp13a4Q5XF90 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Atp13a4Q5XF90 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.93■□□□□ 0.94
Atp13a4Q5XF90 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atp13a4Q5XF90 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atp13a4Q5XF90 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Atp13a4Q5XF90 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Atp13a4Q5XF90 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atp13a4Q5XF90 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atp13a4Q5XF90 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atp13a4Q5XF90 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atp13a4Q5XF90 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Atp13a4Q5XF90 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Atp13a4Q5XF90 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atp13a4Q5XF90 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atp13a4Q5XF90 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Atp13a4Q5XF90 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.92■□□□□ 0.94
Atp13a4Q5XF90 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atp13a4Q5XF90 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atp13a4Q5XF90 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atp13a4Q5XF90 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
Atp13a4Q5XF90 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Atp13a4Q5XF90 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atp13a4Q5XF90 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.91■□□□□ 0.94
Atp13a4Q5XF90 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atp13a4Q5XF90 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atp13a4Q5XF90 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atp13a4Q5XF90 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Atp13a4Q5XF90 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Atp13a4Q5XF90 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atp13a4Q5XF90 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Atp13a4Q5XF90 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.9■□□□□ 0.94
Atp13a4Q5XF90 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atp13a4Q5XF90 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atp13a4Q5XF90 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atp13a4Q5XF90 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Atp13a4Q5XF90 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Atp13a4Q5XF90 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.9■□□□□ 0.94
Atp13a4Q5XF90 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atp13a4Q5XF90 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atp13a4Q5XF90 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atp13a4Q5XF90 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Atp13a4Q5XF90 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Atp13a4Q5XF90 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Atp13a4Q5XF90 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.89■□□□□ 0.93
Atp13a4Q5XF90 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.89■□□□□ 0.93
Atp13a4Q5XF90 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.89■□□□□ 0.93
Atp13a4Q5XF90 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms