Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-2Q5R1I4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-2Q5R1I4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-2Q5R1I4 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.06■□□□□ 0.32
Trav6-2Q5R1I4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-2Q5R1I4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-2Q5R1I4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.06■□□□□ 0.32
Trav6-2Q5R1I4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-2Q5R1I4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-2Q5R1I4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.06■□□□□ 0.32
Trav6-2Q5R1I4 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.06■□□□□ 0.32
Trav6-2Q5R1I4 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.06■□□□□ 0.32
Trav6-2Q5R1I4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trav6-2Q5R1I4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-2Q5R1I4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-2Q5R1I4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-2Q5R1I4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trav6-2Q5R1I4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-2Q5R1I4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-2Q5R1I4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-2Q5R1I4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-2Q5R1I4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.05■□□□□ 0.32
Trav6-2Q5R1I4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-2Q5R1I4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trav6-2Q5R1I4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-2Q5R1I4 Gm7290-201ENSMUST00000104990 617 ntBASIC17.05■□□□□ 0.32
Trav6-2Q5R1I4 Gm12918-201ENSMUST00000120234 636 ntBASIC17.05■□□□□ 0.32
Trav6-2Q5R1I4 Gm15710-201ENSMUST00000121821 636 ntBASIC17.05■□□□□ 0.32
Trav6-2Q5R1I4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.05■□□□□ 0.32
Trav6-2Q5R1I4 Gm5075-201ENSMUST00000196916 622 ntBASIC17.05■□□□□ 0.32
Trav6-2Q5R1I4 Gm6365-201ENSMUST00000054711 744 ntBASIC17.05■□□□□ 0.32
Trav6-2Q5R1I4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.05■□□□□ 0.32
Trav6-2Q5R1I4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.05■□□□□ 0.32
Trav6-2Q5R1I4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-2Q5R1I4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trav6-2Q5R1I4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-2Q5R1I4 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.05■□□□□ 0.32
Trav6-2Q5R1I4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-2Q5R1I4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-2Q5R1I4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-2Q5R1I4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav6-2Q5R1I4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-2Q5R1I4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav6-2Q5R1I4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-2Q5R1I4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-2Q5R1I4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trav6-2Q5R1I4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-2Q5R1I4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-2Q5R1I4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Trav6-2Q5R1I4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-2Q5R1I4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.04■□□□□ 0.32
Trav6-2Q5R1I4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-2Q5R1I4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trav6-2Q5R1I4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trav6-2Q5R1I4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-2Q5R1I4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-2Q5R1I4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-2Q5R1I4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-2Q5R1I4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.03■□□□□ 0.32
Trav6-2Q5R1I4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-2Q5R1I4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-2Q5R1I4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.03■□□□□ 0.32
Trav6-2Q5R1I4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.03■□□□□ 0.32
Trav6-2Q5R1I4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Trav6-2Q5R1I4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-2Q5R1I4 Gm6420-201ENSMUST00000193885 723 ntBASIC17.03■□□□□ 0.32
Trav6-2Q5R1I4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-2Q5R1I4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-2Q5R1I4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-2Q5R1I4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-2Q5R1I4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-2Q5R1I4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.03■□□□□ 0.32
Trav6-2Q5R1I4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-2Q5R1I4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-2Q5R1I4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav6-2Q5R1I4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Trav6-2Q5R1I4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trav6-2Q5R1I4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.02■□□□□ 0.32
Trav6-2Q5R1I4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav6-2Q5R1I4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav6-2Q5R1I4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.02■□□□□ 0.32
Trav6-2Q5R1I4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.02■□□□□ 0.32
Trav6-2Q5R1I4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.02■□□□□ 0.32
Trav6-2Q5R1I4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav6-2Q5R1I4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.02■□□□□ 0.32
Trav6-2Q5R1I4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Trav6-2Q5R1I4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.02■□□□□ 0.31
Trav6-2Q5R1I4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.02■□□□□ 0.31
Trav6-2Q5R1I4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6-2Q5R1I4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6-2Q5R1I4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Trav6-2Q5R1I4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trav6-2Q5R1I4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6-2Q5R1I4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6-2Q5R1I4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6-2Q5R1I4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6-2Q5R1I4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6-2Q5R1I4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6-2Q5R1I4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6-2Q5R1I4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 387.5 ms