Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav8d-2Q5R1B6 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav8d-2Q5R1B6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.02■□□□□ 0.64
Trav8d-2Q5R1B6 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav8d-2Q5R1B6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trav8d-2Q5R1B6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav8d-2Q5R1B6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.01■□□□□ 0.63
Trav8d-2Q5R1B6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav8d-2Q5R1B6 Gm13836-201ENSMUST00000121159 501 ntBASIC19.01■□□□□ 0.63
Trav8d-2Q5R1B6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Trav8d-2Q5R1B6 Gm27275-201ENSMUST00000184318 272 ntBASIC19.01■□□□□ 0.63
Trav8d-2Q5R1B6 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav8d-2Q5R1B6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav8d-2Q5R1B6 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav8d-2Q5R1B6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav8d-2Q5R1B6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav8d-2Q5R1B6 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19■□□□□ 0.63
Trav8d-2Q5R1B6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav8d-2Q5R1B6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Trav8d-2Q5R1B6 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trav8d-2Q5R1B6 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav8d-2Q5R1B6 Gm6576-201ENSMUST00000169678 883 ntBASIC19■□□□□ 0.63
Trav8d-2Q5R1B6 Arhgef33-211ENSMUST00000225658 473 ntBASIC19■□□□□ 0.63
Trav8d-2Q5R1B6 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Trav8d-2Q5R1B6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Trav8d-2Q5R1B6 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19■□□□□ 0.63
Trav8d-2Q5R1B6 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Trav8d-2Q5R1B6 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav8d-2Q5R1B6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trav8d-2Q5R1B6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav8d-2Q5R1B6 Gm12896-201ENSMUST00000118430 226 ntBASIC18.99■□□□□ 0.63
Trav8d-2Q5R1B6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.99■□□□□ 0.63
Trav8d-2Q5R1B6 Gm7860-201ENSMUST00000121190 879 ntBASIC18.99■□□□□ 0.63
Trav8d-2Q5R1B6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trav8d-2Q5R1B6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trav8d-2Q5R1B6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav8d-2Q5R1B6 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav8d-2Q5R1B6 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Trav8d-2Q5R1B6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav8d-2Q5R1B6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.99■□□□□ 0.63
Trav8d-2Q5R1B6 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav8d-2Q5R1B6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav8d-2Q5R1B6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Trav8d-2Q5R1B6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav8d-2Q5R1B6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trav8d-2Q5R1B6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav8d-2Q5R1B6 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.98■□□□□ 0.63
Trav8d-2Q5R1B6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trav8d-2Q5R1B6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav8d-2Q5R1B6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trav8d-2Q5R1B6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Trav8d-2Q5R1B6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav8d-2Q5R1B6 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.97■□□□□ 0.63
Trav8d-2Q5R1B6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav8d-2Q5R1B6 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.97■□□□□ 0.63
Trav8d-2Q5R1B6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Trav8d-2Q5R1B6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.97■□□□□ 0.63
Trav8d-2Q5R1B6 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.97■□□□□ 0.63
Trav8d-2Q5R1B6 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.97■□□□□ 0.63
Trav8d-2Q5R1B6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav8d-2Q5R1B6 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav8d-2Q5R1B6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav8d-2Q5R1B6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Trav8d-2Q5R1B6 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav8d-2Q5R1B6 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav8d-2Q5R1B6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav8d-2Q5R1B6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav8d-2Q5R1B6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Trav8d-2Q5R1B6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.96■□□□□ 0.63
Trav8d-2Q5R1B6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav8d-2Q5R1B6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav8d-2Q5R1B6 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trav8d-2Q5R1B6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav8d-2Q5R1B6 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav8d-2Q5R1B6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Trav8d-2Q5R1B6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav8d-2Q5R1B6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav8d-2Q5R1B6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Trav8d-2Q5R1B6 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.96■□□□□ 0.63
Trav8d-2Q5R1B6 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav8d-2Q5R1B6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trav8d-2Q5R1B6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav8d-2Q5R1B6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav8d-2Q5R1B6 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav8d-2Q5R1B6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav8d-2Q5R1B6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav8d-2Q5R1B6 Gm5643-201ENSMUST00000117081 966 ntBASIC18.95■□□□□ 0.62
Trav8d-2Q5R1B6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.95■□□□□ 0.62
Trav8d-2Q5R1B6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Trav8d-2Q5R1B6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav8d-2Q5R1B6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav8d-2Q5R1B6 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.94■□□□□ 0.62
Trav8d-2Q5R1B6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav8d-2Q5R1B6 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trav8d-2Q5R1B6 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Trav8d-2Q5R1B6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav8d-2Q5R1B6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.94■□□□□ 0.62
Trav8d-2Q5R1B6 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trav8d-2Q5R1B6 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.94■□□□□ 0.62
Trav8d-2Q5R1B6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 384.5 ms