Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps13aQ5H8C4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps13aQ5H8C4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps13aQ5H8C4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps13aQ5H8C4 Gm12896-201ENSMUST00000118430 226 ntBASIC19.54■□□□□ 0.72
Vps13aQ5H8C4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Vps13aQ5H8C4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps13aQ5H8C4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps13aQ5H8C4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps13aQ5H8C4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Vps13aQ5H8C4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps13aQ5H8C4 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps13aQ5H8C4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps13aQ5H8C4 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps13aQ5H8C4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vps13aQ5H8C4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Vps13aQ5H8C4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.52■□□□□ 0.72
Vps13aQ5H8C4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps13aQ5H8C4 Gm10231-201ENSMUST00000181584 441 ntBASIC19.52■□□□□ 0.72
Vps13aQ5H8C4 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps13aQ5H8C4 Gm10175-202ENSMUST00000208752 441 ntBASIC19.52■□□□□ 0.72
Vps13aQ5H8C4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps13aQ5H8C4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps13aQ5H8C4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.52■□□□□ 0.71
Vps13aQ5H8C4 Gm21362-201ENSMUST00000194272 928 ntBASIC19.52■□□□□ 0.71
Vps13aQ5H8C4 Gm10517-202ENSMUST00000192970 758 ntBASIC19.51■□□□□ 0.71
Vps13aQ5H8C4 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps13aQ5H8C4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Vps13aQ5H8C4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Vps13aQ5H8C4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps13aQ5H8C4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps13aQ5H8C4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vps13aQ5H8C4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps13aQ5H8C4 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.51■□□□□ 0.71
Vps13aQ5H8C4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vps13aQ5H8C4 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.5■□□□□ 0.71
Vps13aQ5H8C4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps13aQ5H8C4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.5■□□□□ 0.71
Vps13aQ5H8C4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps13aQ5H8C4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Vps13aQ5H8C4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps13aQ5H8C4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Vps13aQ5H8C4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps13aQ5H8C4 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vps13aQ5H8C4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.49■□□□□ 0.71
Vps13aQ5H8C4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Vps13aQ5H8C4 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps13aQ5H8C4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Vps13aQ5H8C4 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps13aQ5H8C4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps13aQ5H8C4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Vps13aQ5H8C4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vps13aQ5H8C4 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.49■□□□□ 0.71
Vps13aQ5H8C4 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps13aQ5H8C4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps13aQ5H8C4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps13aQ5H8C4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps13aQ5H8C4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vps13aQ5H8C4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vps13aQ5H8C4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps13aQ5H8C4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.49■□□□□ 0.71
Vps13aQ5H8C4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Vps13aQ5H8C4 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Vps13aQ5H8C4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps13aQ5H8C4 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Vps13aQ5H8C4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Vps13aQ5H8C4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps13aQ5H8C4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps13aQ5H8C4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Vps13aQ5H8C4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vps13aQ5H8C4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vps13aQ5H8C4 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.48■□□□□ 0.71
Vps13aQ5H8C4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Vps13aQ5H8C4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Vps13aQ5H8C4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps13aQ5H8C4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Vps13aQ5H8C4 Gm10698-201ENSMUST00000182663 604 ntBASIC19.47■□□□□ 0.71
Vps13aQ5H8C4 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vps13aQ5H8C4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.47■□□□□ 0.71
Vps13aQ5H8C4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.47■□□□□ 0.71
Vps13aQ5H8C4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps13aQ5H8C4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps13aQ5H8C4 Mir5122-201ENSMUST00000175004 89 ntBASIC19.46■□□□□ 0.71
Vps13aQ5H8C4 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vps13aQ5H8C4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps13aQ5H8C4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.46■□□□□ 0.71
Vps13aQ5H8C4 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vps13aQ5H8C4 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Vps13aQ5H8C4 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vps13aQ5H8C4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
Vps13aQ5H8C4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps13aQ5H8C4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vps13aQ5H8C4 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.46■□□□□ 0.71
Vps13aQ5H8C4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps13aQ5H8C4 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Vps13aQ5H8C4 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.46■□□□□ 0.71
Vps13aQ5H8C4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps13aQ5H8C4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps13aQ5H8C4 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps13aQ5H8C4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms