Protein–RNA interactions for Protein: Q3V0K9

Pls1, Plastin-1, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pls1Q3V0K9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pls1Q3V0K9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pls1Q3V0K9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC22.29■■□□□ 1.16
Pls1Q3V0K9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC22.29■■□□□ 1.16
Pls1Q3V0K9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pls1Q3V0K9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pls1Q3V0K9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pls1Q3V0K9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pls1Q3V0K9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pls1Q3V0K9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Pls1Q3V0K9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pls1Q3V0K9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pls1Q3V0K9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pls1Q3V0K9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pls1Q3V0K9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC22.28■■□□□ 1.16
Pls1Q3V0K9 CT030146.1-201ENSMUST00000220919 217 ntBASIC22.28■■□□□ 1.16
Pls1Q3V0K9 AC154266.1-201ENSMUST00000223190 503 ntBASIC22.28■■□□□ 1.16
Pls1Q3V0K9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Pls1Q3V0K9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pls1Q3V0K9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pls1Q3V0K9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pls1Q3V0K9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pls1Q3V0K9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pls1Q3V0K9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pls1Q3V0K9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pls1Q3V0K9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pls1Q3V0K9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pls1Q3V0K9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Pls1Q3V0K9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Pls1Q3V0K9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
Pls1Q3V0K9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Pls1Q3V0K9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pls1Q3V0K9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pls1Q3V0K9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pls1Q3V0K9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pls1Q3V0K9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Pls1Q3V0K9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Pls1Q3V0K9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC22.26■■□□□ 1.15
Pls1Q3V0K9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pls1Q3V0K9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC22.26■■□□□ 1.15
Pls1Q3V0K9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pls1Q3V0K9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Pls1Q3V0K9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.15
Pls1Q3V0K9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pls1Q3V0K9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pls1Q3V0K9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Pls1Q3V0K9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pls1Q3V0K9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Pls1Q3V0K9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pls1Q3V0K9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pls1Q3V0K9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pls1Q3V0K9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pls1Q3V0K9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Pls1Q3V0K9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pls1Q3V0K9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pls1Q3V0K9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pls1Q3V0K9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pls1Q3V0K9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pls1Q3V0K9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Pls1Q3V0K9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pls1Q3V0K9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC22.24■■□□□ 1.15
Pls1Q3V0K9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pls1Q3V0K9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pls1Q3V0K9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC22.24■■□□□ 1.15
Pls1Q3V0K9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Pls1Q3V0K9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pls1Q3V0K9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pls1Q3V0K9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pls1Q3V0K9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pls1Q3V0K9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC22.23■■□□□ 1.15
Pls1Q3V0K9 Gm27011-201ENSMUST00000182352 972 ntBASIC22.23■■□□□ 1.15
Pls1Q3V0K9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pls1Q3V0K9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC22.23■■□□□ 1.15
Pls1Q3V0K9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Pls1Q3V0K9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pls1Q3V0K9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pls1Q3V0K9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pls1Q3V0K9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pls1Q3V0K9 Gm38205-201ENSMUST00000192243 258 ntBASIC22.22■■□□□ 1.15
Pls1Q3V0K9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Pls1Q3V0K9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pls1Q3V0K9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pls1Q3V0K9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Pls1Q3V0K9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pls1Q3V0K9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC22.21■■□□□ 1.15
Pls1Q3V0K9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pls1Q3V0K9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pls1Q3V0K9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pls1Q3V0K9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC22.21■■□□□ 1.15
Pls1Q3V0K9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pls1Q3V0K9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pls1Q3V0K9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pls1Q3V0K9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Pls1Q3V0K9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Pls1Q3V0K9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pls1Q3V0K9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pls1Q3V0K9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pls1Q3V0K9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pls1Q3V0K9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC22.2■■□□□ 1.14
Pls1Q3V0K9 Gm43909-201ENSMUST00000203443 1876 ntBASIC22.2■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms