Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Shisa3Q3UPR0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Shisa3Q3UPR0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Shisa3Q3UPR0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shisa3Q3UPR0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shisa3Q3UPR0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shisa3Q3UPR0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Shisa3Q3UPR0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shisa3Q3UPR0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shisa3Q3UPR0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shisa3Q3UPR0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shisa3Q3UPR0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shisa3Q3UPR0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shisa3Q3UPR0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shisa3Q3UPR0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Shisa3Q3UPR0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Shisa3Q3UPR0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Shisa3Q3UPR0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Shisa3Q3UPR0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.7■□□□□ 0.26
Shisa3Q3UPR0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Shisa3Q3UPR0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.7■□□□□ 0.26
Shisa3Q3UPR0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shisa3Q3UPR0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Shisa3Q3UPR0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shisa3Q3UPR0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shisa3Q3UPR0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Shisa3Q3UPR0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shisa3Q3UPR0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.69■□□□□ 0.26
Shisa3Q3UPR0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shisa3Q3UPR0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shisa3Q3UPR0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shisa3Q3UPR0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shisa3Q3UPR0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shisa3Q3UPR0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shisa3Q3UPR0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Shisa3Q3UPR0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.69■□□□□ 0.26
Shisa3Q3UPR0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Shisa3Q3UPR0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Shisa3Q3UPR0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shisa3Q3UPR0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shisa3Q3UPR0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shisa3Q3UPR0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shisa3Q3UPR0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shisa3Q3UPR0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shisa3Q3UPR0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Shisa3Q3UPR0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.68■□□□□ 0.26
Shisa3Q3UPR0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.68■□□□□ 0.26
Shisa3Q3UPR0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shisa3Q3UPR0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shisa3Q3UPR0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shisa3Q3UPR0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shisa3Q3UPR0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shisa3Q3UPR0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shisa3Q3UPR0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Shisa3Q3UPR0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Shisa3Q3UPR0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shisa3Q3UPR0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shisa3Q3UPR0 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.67■□□□□ 0.26
Shisa3Q3UPR0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shisa3Q3UPR0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shisa3Q3UPR0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shisa3Q3UPR0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shisa3Q3UPR0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shisa3Q3UPR0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shisa3Q3UPR0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shisa3Q3UPR0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shisa3Q3UPR0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Shisa3Q3UPR0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shisa3Q3UPR0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shisa3Q3UPR0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shisa3Q3UPR0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shisa3Q3UPR0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa3Q3UPR0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa3Q3UPR0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa3Q3UPR0 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.66■□□□□ 0.26
Shisa3Q3UPR0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa3Q3UPR0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa3Q3UPR0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa3Q3UPR0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa3Q3UPR0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa3Q3UPR0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa3Q3UPR0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.66■□□□□ 0.26
Shisa3Q3UPR0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.66■□□□□ 0.26
Shisa3Q3UPR0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Shisa3Q3UPR0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.66■□□□□ 0.26
Shisa3Q3UPR0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.66■□□□□ 0.26
Shisa3Q3UPR0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.66■□□□□ 0.26
Shisa3Q3UPR0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa3Q3UPR0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa3Q3UPR0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa3Q3UPR0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa3Q3UPR0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa3Q3UPR0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa3Q3UPR0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa3Q3UPR0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa3Q3UPR0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.66■□□□□ 0.26
Shisa3Q3UPR0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa3Q3UPR0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa3Q3UPR0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Shisa3Q3UPR0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms