Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.83■□□□□ 0.93
Smcr8Q3UMB5 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smcr8Q3UMB5 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smcr8Q3UMB5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smcr8Q3UMB5 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smcr8Q3UMB5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smcr8Q3UMB5 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smcr8Q3UMB5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smcr8Q3UMB5 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Smcr8Q3UMB5 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.82■□□□□ 0.92
Smcr8Q3UMB5 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.82■□□□□ 0.92
Smcr8Q3UMB5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smcr8Q3UMB5 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Smcr8Q3UMB5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smcr8Q3UMB5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smcr8Q3UMB5 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smcr8Q3UMB5 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smcr8Q3UMB5 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smcr8Q3UMB5 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smcr8Q3UMB5 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.81■□□□□ 0.92
Smcr8Q3UMB5 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.81■□□□□ 0.92
Smcr8Q3UMB5 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Smcr8Q3UMB5 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smcr8Q3UMB5 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smcr8Q3UMB5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smcr8Q3UMB5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smcr8Q3UMB5 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smcr8Q3UMB5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smcr8Q3UMB5 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smcr8Q3UMB5 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.8■□□□□ 0.92
Smcr8Q3UMB5 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smcr8Q3UMB5 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smcr8Q3UMB5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smcr8Q3UMB5 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smcr8Q3UMB5 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smcr8Q3UMB5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smcr8Q3UMB5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smcr8Q3UMB5 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Smcr8Q3UMB5 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smcr8Q3UMB5 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smcr8Q3UMB5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smcr8Q3UMB5 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smcr8Q3UMB5 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smcr8Q3UMB5 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smcr8Q3UMB5 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smcr8Q3UMB5 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Smcr8Q3UMB5 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.78■□□□□ 0.92
Smcr8Q3UMB5 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.78■□□□□ 0.92
Smcr8Q3UMB5 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smcr8Q3UMB5 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smcr8Q3UMB5 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smcr8Q3UMB5 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smcr8Q3UMB5 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.77■□□□□ 0.92
Smcr8Q3UMB5 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smcr8Q3UMB5 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smcr8Q3UMB5 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smcr8Q3UMB5 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smcr8Q3UMB5 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.77■□□□□ 0.92
Smcr8Q3UMB5 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Smcr8Q3UMB5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smcr8Q3UMB5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Smcr8Q3UMB5 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Smcr8Q3UMB5 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.76■□□□□ 0.91
Smcr8Q3UMB5 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smcr8Q3UMB5 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smcr8Q3UMB5 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Smcr8Q3UMB5 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smcr8Q3UMB5 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smcr8Q3UMB5 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smcr8Q3UMB5 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Smcr8Q3UMB5 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smcr8Q3UMB5 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.76■□□□□ 0.91
Smcr8Q3UMB5 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smcr8Q3UMB5 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.75■□□□□ 0.91
Smcr8Q3UMB5 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smcr8Q3UMB5 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smcr8Q3UMB5 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.75■□□□□ 0.91
Smcr8Q3UMB5 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smcr8Q3UMB5 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.75■□□□□ 0.91
Smcr8Q3UMB5 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.75■□□□□ 0.91
Smcr8Q3UMB5 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.75■□□□□ 0.91
Smcr8Q3UMB5 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smcr8Q3UMB5 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smcr8Q3UMB5 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smcr8Q3UMB5 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.75■□□□□ 0.91
Smcr8Q3UMB5 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.75■□□□□ 0.91
Smcr8Q3UMB5 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smcr8Q3UMB5 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Smcr8Q3UMB5 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smcr8Q3UMB5 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smcr8Q3UMB5 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Smcr8Q3UMB5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smcr8Q3UMB5 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smcr8Q3UMB5 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.74■□□□□ 0.91
Smcr8Q3UMB5 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smcr8Q3UMB5 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smcr8Q3UMB5 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smcr8Q3UMB5 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Smcr8Q3UMB5 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smcr8Q3UMB5 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms