Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnrc6aQ3UHK8 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.09■□□□□ 0.49
Tnrc6aQ3UHK8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnrc6aQ3UHK8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnrc6aQ3UHK8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tnrc6aQ3UHK8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tnrc6aQ3UHK8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tnrc6aQ3UHK8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Tnrc6aQ3UHK8 Gm12527-201ENSMUST00000117967 564 ntBASIC18.08■□□□□ 0.49
Tnrc6aQ3UHK8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.08■□□□□ 0.49
Tnrc6aQ3UHK8 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.08■□□□□ 0.49
Tnrc6aQ3UHK8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Tnrc6aQ3UHK8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.48
Tnrc6aQ3UHK8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tnrc6aQ3UHK8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Tnrc6aQ3UHK8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Tnrc6aQ3UHK8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.07■□□□□ 0.48
Tnrc6aQ3UHK8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnrc6aQ3UHK8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Tnrc6aQ3UHK8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnrc6aQ3UHK8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnrc6aQ3UHK8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Tnrc6aQ3UHK8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tnrc6aQ3UHK8 Gm13534-201ENSMUST00000121169 513 ntBASIC18.07■□□□□ 0.48
Tnrc6aQ3UHK8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Tnrc6aQ3UHK8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tnrc6aQ3UHK8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnrc6aQ3UHK8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Tnrc6aQ3UHK8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.07■□□□□ 0.48
Tnrc6aQ3UHK8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Tnrc6aQ3UHK8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.06■□□□□ 0.48
Tnrc6aQ3UHK8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tnrc6aQ3UHK8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Tnrc6aQ3UHK8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Tnrc6aQ3UHK8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.06■□□□□ 0.48
Tnrc6aQ3UHK8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tnrc6aQ3UHK8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tnrc6aQ3UHK8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.06■□□□□ 0.48
Tnrc6aQ3UHK8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tnrc6aQ3UHK8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Tnrc6aQ3UHK8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tnrc6aQ3UHK8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Tnrc6aQ3UHK8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Tnrc6aQ3UHK8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Tnrc6aQ3UHK8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tnrc6aQ3UHK8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tnrc6aQ3UHK8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
Tnrc6aQ3UHK8 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tnrc6aQ3UHK8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Tnrc6aQ3UHK8 Gm6420-201ENSMUST00000193885 723 ntBASIC18.05■□□□□ 0.48
Tnrc6aQ3UHK8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tnrc6aQ3UHK8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tnrc6aQ3UHK8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tnrc6aQ3UHK8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tnrc6aQ3UHK8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnrc6aQ3UHK8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tnrc6aQ3UHK8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnrc6aQ3UHK8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Tnrc6aQ3UHK8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnrc6aQ3UHK8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnrc6aQ3UHK8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnrc6aQ3UHK8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.04■□□□□ 0.48
Tnrc6aQ3UHK8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnrc6aQ3UHK8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tnrc6aQ3UHK8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Tnrc6aQ3UHK8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnrc6aQ3UHK8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tnrc6aQ3UHK8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tnrc6aQ3UHK8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Tnrc6aQ3UHK8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Tnrc6aQ3UHK8 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.03■□□□□ 0.48
Tnrc6aQ3UHK8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnrc6aQ3UHK8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnrc6aQ3UHK8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnrc6aQ3UHK8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnrc6aQ3UHK8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Tnrc6aQ3UHK8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.03■□□□□ 0.48
Tnrc6aQ3UHK8 Gm20760-201ENSMUST00000179197 648 ntBASIC18.03■□□□□ 0.48
Tnrc6aQ3UHK8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.03■□□□□ 0.48
Tnrc6aQ3UHK8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Tnrc6aQ3UHK8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnrc6aQ3UHK8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnrc6aQ3UHK8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnrc6aQ3UHK8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.02■□□□□ 0.48
Tnrc6aQ3UHK8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnrc6aQ3UHK8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnrc6aQ3UHK8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnrc6aQ3UHK8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnrc6aQ3UHK8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Tnrc6aQ3UHK8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.02■□□□□ 0.48
Tnrc6aQ3UHK8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.02■□□□□ 0.48
Tnrc6aQ3UHK8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Tnrc6aQ3UHK8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Tnrc6aQ3UHK8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tnrc6aQ3UHK8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Tnrc6aQ3UHK8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tnrc6aQ3UHK8 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.02■□□□□ 0.47
Tnrc6aQ3UHK8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnrc6aQ3UHK8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.01■□□□□ 0.47
Tnrc6aQ3UHK8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms