Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Q3U1D9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Q3U1D9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Q3U1D9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Q3U1D9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Q3U1D9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Q3U1D9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q3U1D9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q3U1D9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q3U1D9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Q3U1D9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q3U1D9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Q3U1D9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q3U1D9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q3U1D9 Gm7514-201ENSMUST00000209475 934 ntBASIC16.82■□□□□ 0.28
Q3U1D9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Q3U1D9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q3U1D9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q3U1D9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q3U1D9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.81■□□□□ 0.28
Q3U1D9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q3U1D9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Q3U1D9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.81■□□□□ 0.28
Q3U1D9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Q3U1D9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Q3U1D9 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.81■□□□□ 0.28
Q3U1D9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q3U1D9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q3U1D9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Q3U1D9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q3U1D9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q3U1D9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Q3U1D9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Q3U1D9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q3U1D9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q3U1D9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Q3U1D9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q3U1D9 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.8■□□□□ 0.28
Q3U1D9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q3U1D9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q3U1D9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q3U1D9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q3U1D9 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.8■□□□□ 0.28
Q3U1D9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Q3U1D9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q3U1D9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Q3U1D9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q3U1D9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q3U1D9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Q3U1D9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Q3U1D9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Q3U1D9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Q3U1D9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q3U1D9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q3U1D9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q3U1D9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Q3U1D9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q3U1D9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q3U1D9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q3U1D9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q3U1D9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q3U1D9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q3U1D9 Gm12933-201ENSMUST00000120203 872 ntBASIC16.78■□□□□ 0.28
Q3U1D9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Q3U1D9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q3U1D9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q3U1D9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Q3U1D9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q3U1D9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q3U1D9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q3U1D9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Q3U1D9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Q3U1D9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Q3U1D9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Q3U1D9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Q3U1D9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.77■□□□□ 0.28
Q3U1D9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Q3U1D9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Q3U1D9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.77■□□□□ 0.28
Q3U1D9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.77■□□□□ 0.28
Q3U1D9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Q3U1D9 Gm10602-201ENSMUST00000098239 609 ntBASIC16.77■□□□□ 0.28
Q3U1D9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.77■□□□□ 0.28
Q3U1D9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Q3U1D9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Q3U1D9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Q3U1D9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Q3U1D9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q3U1D9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Q3U1D9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q3U1D9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.76■□□□□ 0.27
Q3U1D9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q3U1D9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q3U1D9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Q3U1D9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q3U1D9 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.76■□□□□ 0.27
Q3U1D9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q3U1D9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q3U1D9 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.76■□□□□ 0.27
Q3U1D9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms