Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Q3KNL4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
Q3KNL4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Q3KNL4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Q3KNL4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Q3KNL4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Q3KNL4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.01■□□□□ 0.63
Q3KNL4 Gm14117-201ENSMUST00000122417 843 ntBASIC19.01■□□□□ 0.63
Q3KNL4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.01■□□□□ 0.63
Q3KNL4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Q3KNL4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Q3KNL4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Q3KNL4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Q3KNL4 Gm8770-201ENSMUST00000121113 1109 ntBASIC19■□□□□ 0.63
Q3KNL4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Q3KNL4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Q3KNL4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19■□□□□ 0.63
Q3KNL4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Q3KNL4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Q3KNL4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Q3KNL4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Q3KNL4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Q3KNL4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Q3KNL4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Q3KNL4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Q3KNL4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q3KNL4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Q3KNL4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q3KNL4 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q3KNL4 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Q3KNL4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q3KNL4 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q3KNL4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q3KNL4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q3KNL4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.99■□□□□ 0.63
Q3KNL4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Q3KNL4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q3KNL4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q3KNL4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Q3KNL4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Q3KNL4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Q3KNL4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.98■□□□□ 0.63
Q3KNL4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Q3KNL4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q3KNL4 Gm45102-201ENSMUST00000207427 857 ntBASIC18.98■□□□□ 0.63
Q3KNL4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Q3KNL4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Q3KNL4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q3KNL4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q3KNL4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q3KNL4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q3KNL4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q3KNL4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q3KNL4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q3KNL4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.97■□□□□ 0.63
Q3KNL4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.97■□□□□ 0.63
Q3KNL4 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q3KNL4 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Q3KNL4 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.97■□□□□ 0.63
Q3KNL4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q3KNL4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q3KNL4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Q3KNL4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q3KNL4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Q3KNL4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.96■□□□□ 0.63
Q3KNL4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
Q3KNL4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Q3KNL4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Q3KNL4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Q3KNL4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.95■□□□□ 0.62
Q3KNL4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Q3KNL4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Q3KNL4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Q3KNL4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Q3KNL4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Q3KNL4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Q3KNL4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Q3KNL4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Q3KNL4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Q3KNL4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q3KNL4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q3KNL4 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q3KNL4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Q3KNL4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Q3KNL4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Q3KNL4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q3KNL4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Q3KNL4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q3KNL4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Q3KNL4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Q3KNL4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q3KNL4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Q3KNL4 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q3KNL4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q3KNL4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q3KNL4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q3KNL4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Q3KNL4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q3KNL4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q3KNL4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms