Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm21814-202ENSMUST00000203277 873 ntBASIC10.61□□□□□ -0.71
Ush2AQ2QI47 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ush2AQ2QI47 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC10.61□□□□□ -0.71
Ush2AQ2QI47 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ush2AQ2QI47 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ush2AQ2QI47 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ush2AQ2QI47 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ush2AQ2QI47 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ush2AQ2QI47 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ush2AQ2QI47 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ush2AQ2QI47 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Ush2AQ2QI47 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
Ush2AQ2QI47 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ush2AQ2QI47 Gm6190-201ENSMUST00000220683 1374 ntBASIC10.61□□□□□ -0.71
Ush2AQ2QI47 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC10.6□□□□□ -0.71
Ush2AQ2QI47 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC10.6□□□□□ -0.71
Ush2AQ2QI47 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ush2AQ2QI47 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ush2AQ2QI47 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ush2AQ2QI47 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ush2AQ2QI47 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC10.6□□□□□ -0.71
Ush2AQ2QI47 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ush2AQ2QI47 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ush2AQ2QI47 AC153890.1-201ENSMUST00000220021 2469 ntBASIC10.6□□□□□ -0.71
Ush2AQ2QI47 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC10.6□□□□□ -0.71
Ush2AQ2QI47 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ush2AQ2QI47 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ush2AQ2QI47 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC10.6□□□□□ -0.71
Ush2AQ2QI47 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Ush2AQ2QI47 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ush2AQ2QI47 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ush2AQ2QI47 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ush2AQ2QI47 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ush2AQ2QI47 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ush2AQ2QI47 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ush2AQ2QI47 Gm2399-201ENSMUST00000104944 225 ntBASIC10.59□□□□□ -0.71
Ush2AQ2QI47 Gm15847-201ENSMUST00000121417 1065 ntBASIC10.59□□□□□ -0.71
Ush2AQ2QI47 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC10.59□□□□□ -0.71
Ush2AQ2QI47 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ush2AQ2QI47 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ush2AQ2QI47 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Ush2AQ2QI47 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ush2AQ2QI47 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ush2AQ2QI47 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC10.59□□□□□ -0.71
Ush2AQ2QI47 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Ush2AQ2QI47 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Ush2AQ2QI47 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ush2AQ2QI47 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Ush2AQ2QI47 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ush2AQ2QI47 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ush2AQ2QI47 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ush2AQ2QI47 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
Ush2AQ2QI47 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ush2AQ2QI47 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ush2AQ2QI47 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Ush2AQ2QI47 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Ush2AQ2QI47 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC10.58□□□□□ -0.72
Ush2AQ2QI47 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC10.58□□□□□ -0.72
Ush2AQ2QI47 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ush2AQ2QI47 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ush2AQ2QI47 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Ush2AQ2QI47 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ush2AQ2QI47 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ush2AQ2QI47 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ush2AQ2QI47 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ush2AQ2QI47 Gm7284-201ENSMUST00000131667 944 ntBASIC10.58□□□□□ -0.72
Ush2AQ2QI47 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC10.58□□□□□ -0.72
Ush2AQ2QI47 Umpk-ps-201ENSMUST00000211897 827 ntBASIC10.58□□□□□ -0.72
Ush2AQ2QI47 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ush2AQ2QI47 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Ush2AQ2QI47 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Ush2AQ2QI47 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ush2AQ2QI47 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ush2AQ2QI47 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ush2AQ2QI47 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ush2AQ2QI47 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Ush2AQ2QI47 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC10.57□□□□□ -0.72
Ush2AQ2QI47 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ush2AQ2QI47 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ush2AQ2QI47 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ush2AQ2QI47 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ush2AQ2QI47 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC10.57□□□□□ -0.72
Ush2AQ2QI47 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ush2AQ2QI47 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ush2AQ2QI47 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ush2AQ2QI47 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ush2AQ2QI47 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Ush2AQ2QI47 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Ush2AQ2QI47 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ush2AQ2QI47 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ush2AQ2QI47 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ush2AQ2QI47 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC10.57□□□□□ -0.72
Ush2AQ2QI47 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC10.57□□□□□ -0.72
Ush2AQ2QI47 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Ush2AQ2QI47 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ush2AQ2QI47 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC10.56□□□□□ -0.72
Ush2AQ2QI47 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Ush2AQ2QI47 AC163280.1-201ENSMUST00000228194 1100 ntBASIC10.56□□□□□ -0.72
Ush2AQ2QI47 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ush2AQ2QI47 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms