Protein–RNA interactions for Protein: P97471

Smad4, Mothers against decapentaplegic homolog 4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad4P97471 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smad4P97471 Gm9987-201ENSMUST00000069768 567 ntBASIC19.6■□□□□ 0.73
Smad4P97471 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smad4P97471 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smad4P97471 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smad4P97471 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smad4P97471 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smad4P97471 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smad4P97471 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.59■□□□□ 0.73
Smad4P97471 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.59■□□□□ 0.73
Smad4P97471 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Smad4P97471 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Smad4P97471 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smad4P97471 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smad4P97471 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smad4P97471 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smad4P97471 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smad4P97471 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smad4P97471 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smad4P97471 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Smad4P97471 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.58■□□□□ 0.73
Smad4P97471 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smad4P97471 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Smad4P97471 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.58■□□□□ 0.72
Smad4P97471 Gm10698-201ENSMUST00000182663 604 ntBASIC19.58■□□□□ 0.72
Smad4P97471 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.58■□□□□ 0.72
Smad4P97471 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smad4P97471 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smad4P97471 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smad4P97471 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smad4P97471 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Smad4P97471 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smad4P97471 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smad4P97471 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.57■□□□□ 0.72
Smad4P97471 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smad4P97471 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Smad4P97471 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Smad4P97471 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smad4P97471 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smad4P97471 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smad4P97471 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Smad4P97471 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smad4P97471 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Smad4P97471 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smad4P97471 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.56■□□□□ 0.72
Smad4P97471 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Smad4P97471 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smad4P97471 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.56■□□□□ 0.72
Smad4P97471 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smad4P97471 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smad4P97471 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smad4P97471 Mir1199-201ENSMUST00000117015 119 ntBASIC19.56■□□□□ 0.72
Smad4P97471 Gm7860-201ENSMUST00000121190 879 ntBASIC19.56■□□□□ 0.72
Smad4P97471 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.56■□□□□ 0.72
Smad4P97471 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smad4P97471 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smad4P97471 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smad4P97471 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smad4P97471 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.56■□□□□ 0.72
Smad4P97471 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.56■□□□□ 0.72
Smad4P97471 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
Smad4P97471 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smad4P97471 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smad4P97471 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smad4P97471 Gm15378-201ENSMUST00000121894 207 ntBASIC19.55■□□□□ 0.72
Smad4P97471 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.55■□□□□ 0.72
Smad4P97471 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smad4P97471 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.55■□□□□ 0.72
Smad4P97471 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smad4P97471 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smad4P97471 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smad4P97471 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smad4P97471 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smad4P97471 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smad4P97471 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smad4P97471 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Smad4P97471 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smad4P97471 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smad4P97471 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.54■□□□□ 0.72
Smad4P97471 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.54■□□□□ 0.72
Smad4P97471 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smad4P97471 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smad4P97471 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smad4P97471 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smad4P97471 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.54■□□□□ 0.72
Smad4P97471 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smad4P97471 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smad4P97471 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Smad4P97471 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smad4P97471 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Smad4P97471 Gm11249-201ENSMUST00000117071 859 ntBASIC19.53■□□□□ 0.72
Smad4P97471 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.53■□□□□ 0.72
Smad4P97471 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smad4P97471 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smad4P97471 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smad4P97471 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smad4P97471 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smad4P97471 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smad4P97471 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smad4P97471 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms