Protein–RNA interactions for Protein: P85442

Vgll3, Transcription cofactor vestigial-like protein 3, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vgll3P85442 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vgll3P85442 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vgll3P85442 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vgll3P85442 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vgll3P85442 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vgll3P85442 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
Vgll3P85442 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vgll3P85442 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vgll3P85442 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vgll3P85442 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vgll3P85442 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vgll3P85442 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vgll3P85442 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.72■□□□□ 0.75
Vgll3P85442 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vgll3P85442 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vgll3P85442 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vgll3P85442 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Vgll3P85442 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.72■□□□□ 0.75
Vgll3P85442 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vgll3P85442 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vgll3P85442 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vgll3P85442 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.72■□□□□ 0.75
Vgll3P85442 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vgll3P85442 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.72■□□□□ 0.75
Vgll3P85442 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vgll3P85442 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vgll3P85442 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vgll3P85442 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vgll3P85442 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vgll3P85442 Prob1-201ENSMUST00000097619 3021 ntBASIC19.71■□□□□ 0.75
Vgll3P85442 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vgll3P85442 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vgll3P85442 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Vgll3P85442 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vgll3P85442 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vgll3P85442 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vgll3P85442 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Vgll3P85442 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vgll3P85442 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vgll3P85442 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.7■□□□□ 0.74
Vgll3P85442 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vgll3P85442 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vgll3P85442 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vgll3P85442 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vgll3P85442 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vgll3P85442 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vgll3P85442 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vgll3P85442 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vgll3P85442 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vgll3P85442 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vgll3P85442 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vgll3P85442 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vgll3P85442 Gm30023-201ENSMUST00000197970 889 ntBASIC19.69■□□□□ 0.74
Vgll3P85442 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Vgll3P85442 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vgll3P85442 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vgll3P85442 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vgll3P85442 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Vgll3P85442 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Vgll3P85442 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vgll3P85442 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vgll3P85442 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vgll3P85442 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vgll3P85442 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.68■□□□□ 0.74
Vgll3P85442 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vgll3P85442 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Vgll3P85442 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vgll3P85442 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vgll3P85442 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
Vgll3P85442 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vgll3P85442 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Vgll3P85442 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vgll3P85442 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Vgll3P85442 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Vgll3P85442 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vgll3P85442 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vgll3P85442 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vgll3P85442 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Vgll3P85442 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vgll3P85442 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vgll3P85442 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vgll3P85442 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vgll3P85442 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Vgll3P85442 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Vgll3P85442 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Vgll3P85442 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vgll3P85442 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vgll3P85442 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vgll3P85442 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Vgll3P85442 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Vgll3P85442 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Vgll3P85442 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Vgll3P85442 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vgll3P85442 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vgll3P85442 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Vgll3P85442 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vgll3P85442 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vgll3P85442 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Vgll3P85442 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.64■□□□□ 0.73
Vgll3P85442 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms