Protein–RNA interactions for Protein: P70348

Gcm1, Chorion-specific transcription factor GCMa, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcm1P70348 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.21■□□□□ 0.19
Gcm1P70348 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gcm1P70348 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gcm1P70348 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gcm1P70348 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.21■□□□□ 0.18
Gcm1P70348 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gcm1P70348 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gcm1P70348 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gcm1P70348 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gcm1P70348 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gcm1P70348 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.2■□□□□ 0.18
Gcm1P70348 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gcm1P70348 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gcm1P70348 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Gcm1P70348 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gcm1P70348 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Gcm1P70348 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gcm1P70348 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gcm1P70348 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gcm1P70348 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gcm1P70348 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gcm1P70348 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gcm1P70348 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Gcm1P70348 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gcm1P70348 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gcm1P70348 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gcm1P70348 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gcm1P70348 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gcm1P70348 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.19■□□□□ 0.18
Gcm1P70348 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Gcm1P70348 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Gcm1P70348 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.19■□□□□ 0.18
Gcm1P70348 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.19■□□□□ 0.18
Gcm1P70348 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gcm1P70348 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gcm1P70348 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gcm1P70348 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Gcm1P70348 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gcm1P70348 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gcm1P70348 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gcm1P70348 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gcm1P70348 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gcm1P70348 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gcm1P70348 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
Gcm1P70348 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gcm1P70348 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gcm1P70348 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Gcm1P70348 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gcm1P70348 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gcm1P70348 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gcm1P70348 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gcm1P70348 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.18■□□□□ 0.18
Gcm1P70348 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gcm1P70348 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gcm1P70348 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.17■□□□□ 0.18
Gcm1P70348 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.17■□□□□ 0.18
Gcm1P70348 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.17■□□□□ 0.18
Gcm1P70348 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.17■□□□□ 0.18
Gcm1P70348 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.17■□□□□ 0.18
Gcm1P70348 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.17■□□□□ 0.18
Gcm1P70348 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.17■□□□□ 0.18
Gcm1P70348 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Gcm1P70348 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gcm1P70348 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gcm1P70348 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Gcm1P70348 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gcm1P70348 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gcm1P70348 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gcm1P70348 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gcm1P70348 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Gcm1P70348 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gcm1P70348 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gcm1P70348 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gcm1P70348 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.16■□□□□ 0.18
Gcm1P70348 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gcm1P70348 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.16■□□□□ 0.18
Gcm1P70348 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gcm1P70348 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gcm1P70348 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Gcm1P70348 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.16■□□□□ 0.18
Gcm1P70348 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gcm1P70348 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gcm1P70348 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Gcm1P70348 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Gcm1P70348 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gcm1P70348 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gcm1P70348 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gcm1P70348 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gcm1P70348 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gcm1P70348 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Gcm1P70348 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Gcm1P70348 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.15■□□□□ 0.18
Gcm1P70348 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.15■□□□□ 0.18
Gcm1P70348 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Gcm1P70348 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Gcm1P70348 Gm42642-201ENSMUST00000200683 355 ntBASIC16.15■□□□□ 0.18
Gcm1P70348 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gcm1P70348 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gcm1P70348 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Gcm1P70348 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms