Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpl39P62892 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rpl39P62892 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rpl39P62892 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rpl39P62892 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpl39P62892 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rpl39P62892 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpl39P62892 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpl39P62892 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpl39P62892 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpl39P62892 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpl39P62892 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Rpl39P62892 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Rpl39P62892 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpl39P62892 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Rpl39P62892 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpl39P62892 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Rpl39P62892 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpl39P62892 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpl39P62892 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rpl39P62892 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rpl39P62892 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpl39P62892 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpl39P62892 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpl39P62892 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpl39P62892 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpl39P62892 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpl39P62892 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpl39P62892 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpl39P62892 Gm10399-202ENSMUST00000202768 748 ntBASIC13.78□□□□□ -0.2
Rpl39P62892 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpl39P62892 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Rpl39P62892 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpl39P62892 AC122335.2-201ENSMUST00000213901 6181 ntBASIC13.78□□□□□ -0.2
Rpl39P62892 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Rpl39P62892 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.78□□□□□ -0.2
Rpl39P62892 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpl39P62892 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpl39P62892 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rpl39P62892 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
Rpl39P62892 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rpl39P62892 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Rpl39P62892 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpl39P62892 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rpl39P62892 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rpl39P62892 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rpl39P62892 Gm7143-201ENSMUST00000222811 859 ntBASIC13.77□□□□□ -0.21
Rpl39P62892 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC13.77□□□□□ -0.21
Rpl39P62892 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC13.77□□□□□ -0.21
Rpl39P62892 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpl39P62892 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpl39P62892 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rpl39P62892 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpl39P62892 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpl39P62892 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpl39P62892 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Rpl39P62892 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpl39P62892 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC13.76□□□□□ -0.21
Rpl39P62892 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpl39P62892 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC13.76□□□□□ -0.21
Rpl39P62892 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpl39P62892 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpl39P62892 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpl39P62892 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpl39P62892 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpl39P62892 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Rpl39P62892 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC13.76□□□□□ -0.21
Rpl39P62892 Mir6236-201ENSMUST00000184437 123 ntBASIC13.76□□□□□ -0.21
Rpl39P62892 Gm45444-201ENSMUST00000211394 898 ntBASIC13.76□□□□□ -0.21
Rpl39P62892 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Rpl39P62892 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpl39P62892 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC13.76□□□□□ -0.21
Rpl39P62892 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpl39P62892 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpl39P62892 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpl39P62892 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpl39P62892 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpl39P62892 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Rpl39P62892 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rpl39P62892 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rpl39P62892 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC13.75□□□□□ -0.21
Rpl39P62892 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rpl39P62892 Rarb-207ENSMUST00000225921 2756 ntBASIC13.75□□□□□ -0.21
Rpl39P62892 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rpl39P62892 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rpl39P62892 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Rpl39P62892 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rpl39P62892 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Rpl39P62892 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rpl39P62892 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rpl39P62892 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rpl39P62892 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rpl39P62892 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rpl39P62892 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Rpl39P62892 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rpl39P62892 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Rpl39P62892 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rpl39P62892 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rpl39P62892 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rpl39P62892 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms