Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rab4aP56371 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab4aP56371 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab4aP56371 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab4aP56371 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab4aP56371 Haglr-201ENSMUST00000100000 2085 ntBASIC15.28■□□□□ 0.04
Rab4aP56371 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab4aP56371 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rab4aP56371 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rab4aP56371 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rab4aP56371 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rab4aP56371 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rab4aP56371 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rab4aP56371 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rab4aP56371 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rab4aP56371 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rab4aP56371 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rab4aP56371 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rab4aP56371 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rab4aP56371 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab4aP56371 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab4aP56371 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rab4aP56371 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab4aP56371 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab4aP56371 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC15.26■□□□□ 0.03
Rab4aP56371 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab4aP56371 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab4aP56371 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rab4aP56371 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab4aP56371 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab4aP56371 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab4aP56371 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab4aP56371 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rab4aP56371 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rab4aP56371 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rab4aP56371 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab4aP56371 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab4aP56371 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rab4aP56371 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab4aP56371 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab4aP56371 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab4aP56371 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab4aP56371 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab4aP56371 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab4aP56371 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rab4aP56371 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Rab4aP56371 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.25■□□□□ 0.03
Rab4aP56371 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rab4aP56371 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.24■□□□□ 0.03
Rab4aP56371 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rab4aP56371 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC15.24■□□□□ 0.03
Rab4aP56371 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Rab4aP56371 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC15.24■□□□□ 0.03
Rab4aP56371 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab4aP56371 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab4aP56371 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Rab4aP56371 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab4aP56371 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab4aP56371 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab4aP56371 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Rab4aP56371 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab4aP56371 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rab4aP56371 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab4aP56371 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rab4aP56371 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.23■□□□□ 0.03
Rab4aP56371 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rab4aP56371 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab4aP56371 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab4aP56371 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab4aP56371 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rab4aP56371 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rab4aP56371 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab4aP56371 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab4aP56371 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab4aP56371 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rab4aP56371 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rab4aP56371 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab4aP56371 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rab4aP56371 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab4aP56371 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.22■□□□□ 0.03
Rab4aP56371 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab4aP56371 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rab4aP56371 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab4aP56371 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab4aP56371 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab4aP56371 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rab4aP56371 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC15.22■□□□□ 0.03
Rab4aP56371 Gm44428-201ENSMUST00000204474 874 ntBASIC15.22■□□□□ 0.03
Rab4aP56371 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab4aP56371 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab4aP56371 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab4aP56371 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab4aP56371 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab4aP56371 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab4aP56371 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.22■□□□□ 0.03
Rab4aP56371 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rab4aP56371 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab4aP56371 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rab4aP56371 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab4aP56371 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms