Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Limk1P53668 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.97■□□□□ 0.63
Limk1P53668 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Limk1P53668 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Limk1P53668 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Limk1P53668 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.97■□□□□ 0.63
Limk1P53668 Gm13836-201ENSMUST00000121159 501 ntBASIC18.97■□□□□ 0.63
Limk1P53668 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.97■□□□□ 0.63
Limk1P53668 Mir6236-201ENSMUST00000184437 123 ntBASIC18.97■□□□□ 0.63
Limk1P53668 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.97■□□□□ 0.63
Limk1P53668 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.97■□□□□ 0.63
Limk1P53668 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Limk1P53668 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Limk1P53668 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Limk1P53668 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Limk1P53668 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Limk1P53668 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Limk1P53668 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Limk1P53668 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
Limk1P53668 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Limk1P53668 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Limk1P53668 Gm6365-201ENSMUST00000054711 744 ntBASIC18.96■□□□□ 0.63
Limk1P53668 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Limk1P53668 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Limk1P53668 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Limk1P53668 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Limk1P53668 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Limk1P53668 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.95■□□□□ 0.62
Limk1P53668 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Limk1P53668 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.95■□□□□ 0.62
Limk1P53668 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Limk1P53668 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Limk1P53668 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.95■□□□□ 0.62
Limk1P53668 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Limk1P53668 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Limk1P53668 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Limk1P53668 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Limk1P53668 Gm13146-201ENSMUST00000118508 780 ntBASIC18.94■□□□□ 0.62
Limk1P53668 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Limk1P53668 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Limk1P53668 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Limk1P53668 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Limk1P53668 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Limk1P53668 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.93■□□□□ 0.62
Limk1P53668 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Limk1P53668 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Limk1P53668 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Limk1P53668 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Limk1P53668 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Limk1P53668 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Limk1P53668 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Limk1P53668 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Limk1P53668 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Limk1P53668 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Limk1P53668 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Limk1P53668 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.92■□□□□ 0.62
Limk1P53668 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Limk1P53668 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Limk1P53668 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Limk1P53668 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Limk1P53668 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Limk1P53668 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Limk1P53668 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Limk1P53668 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Limk1P53668 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Limk1P53668 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.91■□□□□ 0.62
Limk1P53668 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Limk1P53668 Trmt13-210ENSMUST00000198454 880 ntBASIC18.91■□□□□ 0.62
Limk1P53668 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.91■□□□□ 0.62
Limk1P53668 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Limk1P53668 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Limk1P53668 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Limk1P53668 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Limk1P53668 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Limk1P53668 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Limk1P53668 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.9■□□□□ 0.62
Limk1P53668 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Limk1P53668 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Limk1P53668 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Limk1P53668 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.9■□□□□ 0.62
Limk1P53668 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.9■□□□□ 0.62
Limk1P53668 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Limk1P53668 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Limk1P53668 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.9■□□□□ 0.62
Limk1P53668 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Limk1P53668 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Limk1P53668 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Limk1P53668 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Limk1P53668 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Limk1P53668 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Limk1P53668 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.89■□□□□ 0.61
Limk1P53668 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Limk1P53668 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Limk1P53668 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Limk1P53668 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.89■□□□□ 0.61
Limk1P53668 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Limk1P53668 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.89■□□□□ 0.61
Limk1P53668 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Limk1P53668 Gm6211-202ENSMUST00000167849 925 ntBASIC18.89■□□□□ 0.61
Limk1P53668 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms