Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox18P43680 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Sox18P43680 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Sox18P43680 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.59■□□□□ 0.57
Sox18P43680 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox18P43680 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Sox18P43680 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sox18P43680 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Sox18P43680 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sox18P43680 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Sox18P43680 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox18P43680 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sox18P43680 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox18P43680 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox18P43680 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
Sox18P43680 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Sox18P43680 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox18P43680 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Sox18P43680 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox18P43680 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.57■□□□□ 0.56
Sox18P43680 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox18P43680 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sox18P43680 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Sox18P43680 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox18P43680 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox18P43680 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Sox18P43680 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sox18P43680 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox18P43680 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox18P43680 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Sox18P43680 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.56■□□□□ 0.56
Sox18P43680 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.56■□□□□ 0.56
Sox18P43680 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Sox18P43680 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox18P43680 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox18P43680 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox18P43680 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sox18P43680 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.56■□□□□ 0.56
Sox18P43680 Gm6420-201ENSMUST00000193885 723 ntBASIC18.56■□□□□ 0.56
Sox18P43680 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox18P43680 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox18P43680 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox18P43680 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox18P43680 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox18P43680 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox18P43680 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sox18P43680 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.55■□□□□ 0.56
Sox18P43680 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.55■□□□□ 0.56
Sox18P43680 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox18P43680 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox18P43680 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox18P43680 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox18P43680 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox18P43680 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Sox18P43680 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sox18P43680 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.54■□□□□ 0.56
Sox18P43680 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.54■□□□□ 0.56
Sox18P43680 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox18P43680 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Sox18P43680 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox18P43680 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.54■□□□□ 0.56
Sox18P43680 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox18P43680 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sox18P43680 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox18P43680 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox18P43680 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox18P43680 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox18P43680 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sox18P43680 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
Sox18P43680 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox18P43680 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox18P43680 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox18P43680 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox18P43680 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Sox18P43680 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox18P43680 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.53■□□□□ 0.56
Sox18P43680 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox18P43680 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox18P43680 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox18P43680 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox18P43680 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox18P43680 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox18P43680 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox18P43680 Gm6576-201ENSMUST00000169678 883 ntBASIC18.52■□□□□ 0.56
Sox18P43680 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox18P43680 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sox18P43680 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.52■□□□□ 0.55
Sox18P43680 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox18P43680 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Sox18P43680 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Sox18P43680 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.51■□□□□ 0.55
Sox18P43680 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sox18P43680 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox18P43680 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.51■□□□□ 0.55
Sox18P43680 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox18P43680 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox18P43680 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox18P43680 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox18P43680 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sox18P43680 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms