Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Gm12922-201ENSMUST00000120626 809 ntBASIC21.67■■□□□ 1.06
Sdc2P43407 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.67■■□□□ 1.06
Sdc2P43407 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sdc2P43407 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sdc2P43407 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sdc2P43407 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sdc2P43407 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Sdc2P43407 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC21.66■■□□□ 1.06
Sdc2P43407 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sdc2P43407 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sdc2P43407 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Sdc2P43407 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sdc2P43407 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
Sdc2P43407 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Sdc2P43407 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sdc2P43407 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sdc2P43407 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sdc2P43407 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.65■■□□□ 1.06
Sdc2P43407 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sdc2P43407 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Sdc2P43407 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Sdc2P43407 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sdc2P43407 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.65■■□□□ 1.06
Sdc2P43407 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.65■■□□□ 1.06
Sdc2P43407 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.06
Sdc2P43407 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sdc2P43407 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sdc2P43407 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sdc2P43407 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Sdc2P43407 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sdc2P43407 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sdc2P43407 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.63■■□□□ 1.05
Sdc2P43407 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sdc2P43407 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
Sdc2P43407 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sdc2P43407 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sdc2P43407 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sdc2P43407 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.63■■□□□ 1.05
Sdc2P43407 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sdc2P43407 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sdc2P43407 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Sdc2P43407 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sdc2P43407 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sdc2P43407 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sdc2P43407 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sdc2P43407 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sdc2P43407 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sdc2P43407 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sdc2P43407 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Sdc2P43407 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Sdc2P43407 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sdc2P43407 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.62■■□□□ 1.05
Sdc2P43407 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.62■■□□□ 1.05
Sdc2P43407 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.62■■□□□ 1.05
Sdc2P43407 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.62■■□□□ 1.05
Sdc2P43407 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sdc2P43407 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sdc2P43407 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
Sdc2P43407 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sdc2P43407 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.62■■□□□ 1.05
Sdc2P43407 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sdc2P43407 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
Sdc2P43407 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sdc2P43407 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sdc2P43407 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sdc2P43407 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sdc2P43407 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sdc2P43407 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Sdc2P43407 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sdc2P43407 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sdc2P43407 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.6■■□□□ 1.05
Sdc2P43407 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Sdc2P43407 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sdc2P43407 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.6■■□□□ 1.05
Sdc2P43407 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sdc2P43407 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Sdc2P43407 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
Sdc2P43407 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sdc2P43407 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sdc2P43407 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sdc2P43407 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Sdc2P43407 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sdc2P43407 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Sdc2P43407 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sdc2P43407 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Sdc2P43407 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.59■■□□□ 1.05
Sdc2P43407 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
Sdc2P43407 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Sdc2P43407 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.59■■□□□ 1.05
Sdc2P43407 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Sdc2P43407 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sdc2P43407 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sdc2P43407 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Sdc2P43407 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sdc2P43407 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Sdc2P43407 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.58■■□□□ 1.05
Sdc2P43407 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Sdc2P43407 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sdc2P43407 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Sdc2P43407 Golph3-205ENSMUST00000228671 2842 ntBASIC21.58■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms