Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cdx2P43241 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.51■□□□□ 0.55
Cdx2P43241 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdx2P43241 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.51■□□□□ 0.55
Cdx2P43241 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.51■□□□□ 0.55
Cdx2P43241 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdx2P43241 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdx2P43241 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Cdx2P43241 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.51■□□□□ 0.55
Cdx2P43241 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdx2P43241 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdx2P43241 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Cdx2P43241 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.5■□□□□ 0.55
Cdx2P43241 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cdx2P43241 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cdx2P43241 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cdx2P43241 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.5■□□□□ 0.55
Cdx2P43241 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdx2P43241 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdx2P43241 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdx2P43241 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cdx2P43241 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Cdx2P43241 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Cdx2P43241 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdx2P43241 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdx2P43241 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdx2P43241 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Cdx2P43241 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Cdx2P43241 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Cdx2P43241 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cdx2P43241 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdx2P43241 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.49■□□□□ 0.55
Cdx2P43241 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.49■□□□□ 0.55
Cdx2P43241 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cdx2P43241 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.49■□□□□ 0.55
Cdx2P43241 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdx2P43241 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Cdx2P43241 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdx2P43241 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdx2P43241 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Cdx2P43241 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Cdx2P43241 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdx2P43241 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdx2P43241 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdx2P43241 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdx2P43241 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.48■□□□□ 0.55
Cdx2P43241 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdx2P43241 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdx2P43241 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Cdx2P43241 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdx2P43241 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdx2P43241 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Cdx2P43241 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdx2P43241 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.47■□□□□ 0.55
Cdx2P43241 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdx2P43241 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Cdx2P43241 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdx2P43241 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdx2P43241 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.47■□□□□ 0.55
Cdx2P43241 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.47■□□□□ 0.55
Cdx2P43241 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdx2P43241 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.47■□□□□ 0.55
Cdx2P43241 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cdx2P43241 Trmt13-210ENSMUST00000198454 880 ntBASIC18.47■□□□□ 0.55
Cdx2P43241 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.47■□□□□ 0.55
Cdx2P43241 Gm10812-201ENSMUST00000099864 546 ntBASIC18.47■□□□□ 0.55
Cdx2P43241 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdx2P43241 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cdx2P43241 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cdx2P43241 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdx2P43241 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdx2P43241 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdx2P43241 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.46■□□□□ 0.55
Cdx2P43241 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Cdx2P43241 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdx2P43241 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Cdx2P43241 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cdx2P43241 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.45■□□□□ 0.54
Cdx2P43241 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cdx2P43241 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdx2P43241 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdx2P43241 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdx2P43241 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Cdx2P43241 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.45■□□□□ 0.54
Cdx2P43241 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cdx2P43241 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Cdx2P43241 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdx2P43241 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.45■□□□□ 0.54
Cdx2P43241 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdx2P43241 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
Cdx2P43241 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Cdx2P43241 Gm7860-201ENSMUST00000121190 879 ntBASIC18.44■□□□□ 0.54
Cdx2P43241 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.44■□□□□ 0.54
Cdx2P43241 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdx2P43241 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.44■□□□□ 0.54
Cdx2P43241 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdx2P43241 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Cdx2P43241 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdx2P43241 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Cdx2P43241 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms