Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-2P42586 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-2P42586 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.8■□□□□ 0.44
Nkx2-2P42586 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.8■□□□□ 0.44
Nkx2-2P42586 Gm26833-201ENSMUST00000180899 440 ntBASIC17.8■□□□□ 0.44
Nkx2-2P42586 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-2P42586 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-2P42586 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-2P42586 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-2P42586 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-2P42586 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-2P42586 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-2P42586 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.79■□□□□ 0.44
Nkx2-2P42586 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-2P42586 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
Nkx2-2P42586 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.79■□□□□ 0.44
Nkx2-2P42586 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-2P42586 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-2P42586 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-2P42586 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-2P42586 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-2P42586 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx2-2P42586 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx2-2P42586 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx2-2P42586 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx2-2P42586 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx2-2P42586 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx2-2P42586 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx2-2P42586 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Nkx2-2P42586 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx2-2P42586 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx2-2P42586 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx2-2P42586 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx2-2P42586 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Nkx2-2P42586 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx2-2P42586 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Nkx2-2P42586 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Nkx2-2P42586 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx2-2P42586 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Nkx2-2P42586 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx2-2P42586 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.77■□□□□ 0.44
Nkx2-2P42586 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Nkx2-2P42586 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nkx2-2P42586 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nkx2-2P42586 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Nkx2-2P42586 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.77■□□□□ 0.43
Nkx2-2P42586 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Nkx2-2P42586 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.77■□□□□ 0.43
Nkx2-2P42586 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Nkx2-2P42586 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx2-2P42586 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Nkx2-2P42586 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx2-2P42586 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx2-2P42586 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.76■□□□□ 0.43
Nkx2-2P42586 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx2-2P42586 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx2-2P42586 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.76■□□□□ 0.43
Nkx2-2P42586 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-2P42586 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-2P42586 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-2P42586 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-2P42586 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-2P42586 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-2P42586 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-2P42586 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Nkx2-2P42586 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-2P42586 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-2P42586 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Nkx2-2P42586 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx2-2P42586 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-2P42586 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.74■□□□□ 0.43
Nkx2-2P42586 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-2P42586 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-2P42586 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-2P42586 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-2P42586 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-2P42586 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.74■□□□□ 0.43
Nkx2-2P42586 Gm40848-201ENSMUST00000221998 324 ntBASIC17.74■□□□□ 0.43
Nkx2-2P42586 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-2P42586 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-2P42586 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.74■□□□□ 0.43
Nkx2-2P42586 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx2-2P42586 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-2P42586 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-2P42586 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-2P42586 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-2P42586 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-2P42586 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-2P42586 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Nkx2-2P42586 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.73■□□□□ 0.43
Nkx2-2P42586 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.73■□□□□ 0.43
Nkx2-2P42586 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-2P42586 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-2P42586 Gm27801-201ENSMUST00000184174 223 ntBASIC17.73■□□□□ 0.43
Nkx2-2P42586 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.73■□□□□ 0.43
Nkx2-2P42586 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-2P42586 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Nkx2-2P42586 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-2P42586 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx2-2P42586 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms