Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cxcl12P40224 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cxcl12P40224 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.12■□□□□ 0.81
Cxcl12P40224 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.12■□□□□ 0.81
Cxcl12P40224 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.12■□□□□ 0.81
Cxcl12P40224 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.12■□□□□ 0.81
Cxcl12P40224 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.12■□□□□ 0.81
Cxcl12P40224 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
Cxcl12P40224 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cxcl12P40224 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cxcl12P40224 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Cxcl12P40224 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cxcl12P40224 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Cxcl12P40224 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cxcl12P40224 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cxcl12P40224 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cxcl12P40224 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Cxcl12P40224 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Cxcl12P40224 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Cxcl12P40224 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cxcl12P40224 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Cxcl12P40224 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Cxcl12P40224 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Cxcl12P40224 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cxcl12P40224 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.1■□□□□ 0.81
Cxcl12P40224 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cxcl12P40224 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
Cxcl12P40224 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cxcl12P40224 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cxcl12P40224 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Cxcl12P40224 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cxcl12P40224 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cxcl12P40224 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cxcl12P40224 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cxcl12P40224 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Cxcl12P40224 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cxcl12P40224 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cxcl12P40224 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cxcl12P40224 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cxcl12P40224 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cxcl12P40224 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cxcl12P40224 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cxcl12P40224 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cxcl12P40224 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cxcl12P40224 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Cxcl12P40224 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cxcl12P40224 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cxcl12P40224 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cxcl12P40224 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cxcl12P40224 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cxcl12P40224 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Cxcl12P40224 Gm15565-201ENSMUST00000118890 427 ntBASIC20.08■□□□□ 0.81
Cxcl12P40224 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cxcl12P40224 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cxcl12P40224 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Cxcl12P40224 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cxcl12P40224 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.07■□□□□ 0.8
Cxcl12P40224 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cxcl12P40224 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cxcl12P40224 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cxcl12P40224 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cxcl12P40224 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cxcl12P40224 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.07■□□□□ 0.8
Cxcl12P40224 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cxcl12P40224 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cxcl12P40224 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Cxcl12P40224 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cxcl12P40224 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cxcl12P40224 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Cxcl12P40224 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cxcl12P40224 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Cxcl12P40224 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.06■□□□□ 0.8
Cxcl12P40224 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Cxcl12P40224 Gm11643-201ENSMUST00000119578 864 ntBASIC20.06■□□□□ 0.8
Cxcl12P40224 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cxcl12P40224 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cxcl12P40224 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Cxcl12P40224 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cxcl12P40224 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cxcl12P40224 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Cxcl12P40224 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Cxcl12P40224 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cxcl12P40224 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cxcl12P40224 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cxcl12P40224 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Cxcl12P40224 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cxcl12P40224 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cxcl12P40224 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cxcl12P40224 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cxcl12P40224 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cxcl12P40224 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cxcl12P40224 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cxcl12P40224 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Cxcl12P40224 AA386476-201ENSMUST00000098781 1665 ntBASIC20.04■□□□□ 0.8
Cxcl12P40224 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cxcl12P40224 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.04■□□□□ 0.8
Cxcl12P40224 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.04■□□□□ 0.8
Cxcl12P40224 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.04■□□□□ 0.8
Cxcl12P40224 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cxcl12P40224 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms