Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdh4P39038 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.52■□□□□ 0.55
Cdh4P39038 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdh4P39038 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdh4P39038 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh4P39038 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh4P39038 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh4P39038 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh4P39038 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Cdh4P39038 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.51■□□□□ 0.55
Cdh4P39038 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.51■□□□□ 0.55
Cdh4P39038 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.51■□□□□ 0.55
Cdh4P39038 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh4P39038 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh4P39038 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh4P39038 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh4P39038 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.51■□□□□ 0.55
Cdh4P39038 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh4P39038 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh4P39038 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh4P39038 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh4P39038 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cdh4P39038 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh4P39038 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.5■□□□□ 0.55
Cdh4P39038 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh4P39038 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh4P39038 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh4P39038 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.5■□□□□ 0.55
Cdh4P39038 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cdh4P39038 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Cdh4P39038 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh4P39038 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh4P39038 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cdh4P39038 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh4P39038 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Cdh4P39038 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh4P39038 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.49■□□□□ 0.55
Cdh4P39038 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh4P39038 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh4P39038 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Cdh4P39038 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh4P39038 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh4P39038 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.49■□□□□ 0.55
Cdh4P39038 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh4P39038 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh4P39038 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh4P39038 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh4P39038 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh4P39038 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh4P39038 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh4P39038 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh4P39038 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh4P39038 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh4P39038 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh4P39038 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Cdh4P39038 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh4P39038 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh4P39038 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh4P39038 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh4P39038 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh4P39038 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh4P39038 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Cdh4P39038 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh4P39038 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Cdh4P39038 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.47■□□□□ 0.55
Cdh4P39038 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Cdh4P39038 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh4P39038 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh4P39038 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh4P39038 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh4P39038 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh4P39038 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh4P39038 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.47■□□□□ 0.55
Cdh4P39038 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh4P39038 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh4P39038 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh4P39038 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.46■□□□□ 0.55
Cdh4P39038 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Cdh4P39038 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.46■□□□□ 0.55
Cdh4P39038 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh4P39038 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh4P39038 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh4P39038 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh4P39038 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh4P39038 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh4P39038 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.54
Cdh4P39038 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Cdh4P39038 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh4P39038 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cdh4P39038 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.45■□□□□ 0.54
Cdh4P39038 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh4P39038 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh4P39038 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh4P39038 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh4P39038 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh4P39038 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdh4P39038 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cdh4P39038 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.44■□□□□ 0.54
Cdh4P39038 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Cdh4P39038 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms