Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LdlrP35951 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LdlrP35951 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LdlrP35951 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LdlrP35951 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LdlrP35951 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LdlrP35951 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LdlrP35951 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LdlrP35951 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LdlrP35951 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LdlrP35951 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LdlrP35951 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LdlrP35951 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LdlrP35951 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LdlrP35951 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LdlrP35951 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LdlrP35951 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LdlrP35951 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
LdlrP35951 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.21■□□□□ 0.67
LdlrP35951 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.21■□□□□ 0.67
LdlrP35951 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LdlrP35951 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.21■□□□□ 0.67
LdlrP35951 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LdlrP35951 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LdlrP35951 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
LdlrP35951 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LdlrP35951 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LdlrP35951 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
LdlrP35951 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
LdlrP35951 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LdlrP35951 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LdlrP35951 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LdlrP35951 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LdlrP35951 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LdlrP35951 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
LdlrP35951 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LdlrP35951 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.2■□□□□ 0.66
LdlrP35951 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LdlrP35951 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LdlrP35951 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LdlrP35951 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LdlrP35951 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LdlrP35951 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
LdlrP35951 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LdlrP35951 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LdlrP35951 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LdlrP35951 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LdlrP35951 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
LdlrP35951 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LdlrP35951 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LdlrP35951 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LdlrP35951 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LdlrP35951 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.18■□□□□ 0.66
LdlrP35951 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
LdlrP35951 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
LdlrP35951 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.18■□□□□ 0.66
LdlrP35951 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LdlrP35951 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.18■□□□□ 0.66
LdlrP35951 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.18■□□□□ 0.66
LdlrP35951 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.18■□□□□ 0.66
LdlrP35951 Gm9870-201ENSMUST00000063874 645 ntBASIC19.18■□□□□ 0.66
LdlrP35951 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
LdlrP35951 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LdlrP35951 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LdlrP35951 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LdlrP35951 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LdlrP35951 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
LdlrP35951 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LdlrP35951 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.17■□□□□ 0.66
LdlrP35951 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.17■□□□□ 0.66
LdlrP35951 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LdlrP35951 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LdlrP35951 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.17■□□□□ 0.66
LdlrP35951 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LdlrP35951 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LdlrP35951 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LdlrP35951 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LdlrP35951 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LdlrP35951 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LdlrP35951 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LdlrP35951 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LdlrP35951 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.16■□□□□ 0.66
LdlrP35951 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LdlrP35951 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LdlrP35951 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
LdlrP35951 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
LdlrP35951 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LdlrP35951 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LdlrP35951 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
LdlrP35951 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LdlrP35951 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LdlrP35951 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
LdlrP35951 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LdlrP35951 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.15■□□□□ 0.66
LdlrP35951 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.15■□□□□ 0.66
LdlrP35951 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.15■□□□□ 0.66
LdlrP35951 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.15■□□□□ 0.66
LdlrP35951 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.15■□□□□ 0.66
LdlrP35951 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LdlrP35951 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms